PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
rheum_tanguticum_RtaG0046093.1 rheum_tanguticum rheum_tanguticum_RtaG0046093.1
rhizophora_apiculata_RA_01290 rhizophora_apiculata rhizophora_apiculata_RA_01290
rhizophora_apiculata_RA_22275 rhizophora_apiculata rhizophora_apiculata_RA_22275
Rcrescaffold2480217680 rhodiola_crenulata Rcrescaffold2480217680
Rdelscaffold34010224410 rhododendron_delavayi Rdelscaffold34010224410
KAG5563320.1_rhododendron_griersonianum rhododendron_griersonianum KAG5563320.1_rhododendron_griersonianum
rhododendron_molle_KAI8541736.1 rhododendron_molle rhododendron_molle_KAI8541736.1
rhododendron_molle_KAI8569666.1 rhododendron_molle rhododendron_molle_KAI8569666.1
rhododendron_molle_KAI8569667.1 rhododendron_molle rhododendron_molle_KAI8569667.1
Rova09G0033270 rhododendron_ovatum Rova09G0033270
rhododendron_vialii_GWHPCAXW009443 rhododendron_vialii rhododendron_vialii_GWHPCAXW009443
rhododendron_vialii_GWHPCAXW009444 rhododendron_vialii rhododendron_vialii_GWHPCAXW009444
rhododendron_vialii_GWHPCAXW012411 rhododendron_vialii rhododendron_vialii_GWHPCAXW012411
rhododendron_vialii_GWHPCAXW012412 rhododendron_vialii rhododendron_vialii_GWHPCAXW012412
rhododendron_vialii_GWHPCAXW012413 rhododendron_vialii rhododendron_vialii_GWHPCAXW012413
rhoiptelea_chiliantha.genome_RCH_Chr08G12790.1 rhoiptelea_chiliantha rhoiptelea_chiliantha.genome_RCH_Chr08G12790.1
rhoiptelea_chiliantha.genome_RCH_Chr13G10110.1 rhoiptelea_chiliantha rhoiptelea_chiliantha.genome_RCH_Chr13G10110.1
rhynchospora_breviuscula_mRNA10265 rhynchospora_breviuscula rhynchospora_breviuscula_mRNA10265
rhynchospora_pubera_mRNA15414 rhynchospora_pubera rhynchospora_pubera_mRNA15414
rhynchospora_pubera_mRNA36057 rhynchospora_pubera rhynchospora_pubera_mRNA36057
rhynchospora_pubera_mRNA58071 rhynchospora_pubera rhynchospora_pubera_mRNA58071
rhynchospora_pubera_mRNA62204 rhynchospora_pubera rhynchospora_pubera_mRNA62204
rhynchospora_tenuis_mRNA18797 rhynchospora_tenuis rhynchospora_tenuis_mRNA18797
Rnatscaffold_80205830 ricciocarpus_natans Rnatscaffold_80205830
Rcom301900254090.1 ricinus_communis Rcom301900254090.1
robinia_pseudoacacia_CHAGGene02128 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene02128
robinia_pseudoacacia_CHAGGene18601 robinia_pseudoacacia robinia_pseudoacacia_CHAGGene18601
Rgor774590069390.1 roridula_gorgonias Rgor774590069390.1
ROchi07G0016940.1 rosa_chinensis ROchi07G0016940.1
RmulRmu_sc0006080.10410230.v1.475 rosa_multiflora RmulRmu_sc0006080.10410230.v1.475