PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
GWHPAAYT017975 pyrus_betuleafolia GWHPAAYT017975
GWHPAAYT045619 pyrus_betuleafolia GWHPAAYT045619
Pbre06G0011360 pyrus_bretschneideri Pbre06G0011360
Pbre06G0013610 pyrus_bretschneideri Pbre06G0013610
Pbre07G0011450 pyrus_bretschneideri Pbre07G0011450
PYcom06G0006320.1 pyrus_communis PYcom06G0006320.1
PYcom14G0007890.1 pyrus_communis PYcom14G0007890.1
pyrus_ussuriensis_x_communis_Pdr14g010780.1 pyrus_ussuriensis_x_communis pyrus_ussuriensis_x_communis_Pdr14g010780.1
pyrus_ussuriensis_x_communis_Pdr14g010800.1 pyrus_ussuriensis_x_communis pyrus_ussuriensis_x_communis_Pdr14g010800.1
pyrus_ussuriensis_x_communis_Pdr14g010840.1 pyrus_ussuriensis_x_communis pyrus_ussuriensis_x_communis_Pdr14g010840.1
pyrus_ussuriensis_x_communis_Pdr6g008510.1 pyrus_ussuriensis_x_communis pyrus_ussuriensis_x_communis_Pdr6g008510.1
quercus_dentata_GWHPBRAD035134 quercus_dentata quercus_dentata_GWHPBRAD035134
quercus_lobata_QL03p013052 quercus_lobata quercus_lobata_QL03p013052
quercus_lobata_QL12p031809 quercus_lobata quercus_lobata_QL12p031809
Qrob08G0014640 quercus_robur Qrob08G0014640
QrobQrob_H2.3_Sc00000300002110 quercus_robur QrobQrob_H2.3_Sc00000300002110
quercus_rubra_Qurub.12G145100.1 quercus_rubra quercus_rubra_Qurub.12G145100.1
XP_023870431.1 quercus_suber XP_023870431.1
quercus_variabilis_Quercus_variabilis00005302.1 quercus_variabilis quercus_variabilis_Quercus_variabilis00005302.1
Rnitcontig_2140044620 racomitrium_nitidulum Rnitcontig_2140044620
Rnitcontig_8560297600 racomitrium_nitidulum Rnitcontig_8560297600
RdisGWHAAKD000377830157640.1 raddia_distichophylla RdisGWHAAKD000377830157640.1
Rgu000035 raddia_guianensis Rgu000035
Rgu006876 raddia_guianensis Rgu006876
Rgu020948 raddia_guianensis Rgu020948
raphanus_raphanistrum_GWHPANWN045426 raphanus_raphanistrum raphanus_raphanistrum_GWHPANWN045426
raphanus_raphanistrum_GWHPANWN045514 raphanus_raphanistrum raphanus_raphanistrum_GWHPANWN045514
Rsat09G0013930 raphanus_sativus Rsat09G0013930
Rsat09G0014930 raphanus_sativus Rsat09G0014930
Rser1539670016910 regmatodon_serrulatus Rser1539670016910