PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
prunus_fruticosa_Mdom_HF10961-RA_R0 prunus_fruticosa prunus_fruticosa_Mdom_HF10961-RA_R0
prunus_fruticosa_Pper_rna-XM_007209467.2_R0 prunus_fruticosa prunus_fruticosa_Pper_rna-XM_007209467.2_R0
prunus_humilis_GWHPBCKI029187 prunus_humilis prunus_humilis_GWHPBCKI029187
prunus_kansuensis_Pka05g1118 prunus_kansuensis prunus_kansuensis_Pka05g1118
prunus_kanzakura_KWZCAM5g2550.1 prunus_kanzakura prunus_kanzakura_KWZCAM5g2550.1
prunus_kanzakura_KWZSPE5g2561.1 prunus_kanzakura prunus_kanzakura_KWZSPE5g2561.1
Pruma.5G159400.t1.p1_1 prunus_mandshurica Pruma.5G159400.t1.p1_1
prunus_mira_Pmi05g1188 prunus_mira prunus_mira_Pmi05g1188
prunus_mongolica_GWHPBQDV014294.1 prunus_mongolica prunus_mongolica_GWHPBQDV014294.1
XP_008238954.1 prunus_mume XP_008238954.1
Pper05G0010630.1 prunus_persica Pper05G0010630.1
prunus_salicina_evm.model.Contig1.88 prunus_salicina prunus_salicina_evm.model.Contig1.88
Prusib.3G223200.t1.p1_1 prunus_sibirica Prusib.3G223200.t1.p1_1
Prusib.5G180300.t1.p1_1 prunus_sibirica Prusib.5G180300.t1.p1_1
prunus_yedoensis_CYE_r3.1SPA0_g031920.1 prunus_yedoensis prunus_yedoensis_CYE_r3.1SPA0_g031920.1
prunus_yedoensis_CYE_r3.1SPA5_g016610.1 prunus_yedoensis prunus_yedoensis_CYE_r3.1SPA5_g016610.1
przewalskia_tangutica_MNPT029899.1 przewalskia_tangutica przewalskia_tangutica_MNPT029899.1
Pcin2008390251680 pseudobryum_cinclidioides Pcin2008390251680
psidium_guajava_evm.model.ctg26.101 psidium_guajava psidium_guajava_evm.model.ctg26.101
Pstescaffold1250105430.1 pterocarya_stenoptera Pstescaffold1250105430.1
Pstescaffold13760109640.1 pterocarya_stenoptera Pstescaffold13760109640.1
Pstescaffold85910386460.1 pterocarya_stenoptera Pstescaffold85910386460.1
Pwilscaffold_100032770 ptychomitrium_wilsonii Pwilscaffold_100032770
Pwilscaffold_30138340 ptychomitrium_wilsonii Pwilscaffold_30138340
Pcyg2176910034620 ptychomnion_cygnisetum Pcyg2176910034620
Pten02G0028990.1 puccinellia_tenuiflora Pten02G0028990.1
pugionium_cornutum_Pco08230.t1 pugionium_cornutum pugionium_cornutum_Pco08230.t1
pugionium_dolabratum_Pdo13524.t1 pugionium_dolabratum pugionium_dolabratum_Pdo13524.t1
PyezPY_20076030 pyropia_yezoensis PyezPY_20076030
Pspiscaffold_50097730 pyrrhobryum_spiniforme Pspiscaffold_50097730