PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
portulaca_oleracea_GWHPCBIU021579 portulaca_oleracea portulaca_oleracea_GWHPCBIU021579
portulaca_oleracea_GWHPCBIU032621 portulaca_oleracea portulaca_oleracea_GWHPCBIU032621
6478_t potentilla_micrantha 6478_t
Pcol02G0002650.1 prasinoderma_coloniale Pcol02G0002650.1
primula_veris_pveT_jg16205 primula_veris primula_veris_pveT_jg16205
primula_veris_pveT_jg5386 primula_veris primula_veris_pveT_jg5386
PRvulLH_v2_00011120138480.1 primula_vulgaris PRvulLH_v2_00011120138480.1
PRvulLH_v2_00039030216090.1 primula_vulgaris PRvulLH_v2_00039030216090.1
prosopis_alba_XP_028774796.1 prosopis_alba prosopis_alba_XP_028774796.1
prosopis_alba_XP_028782982.1 prosopis_alba prosopis_alba_XP_028782982.1
protea_cynaroides_KAJ4950912.1 protea_cynaroides protea_cynaroides_KAJ4950912.1
protea_cynaroides_KAJ4951310.1 protea_cynaroides protea_cynaroides_KAJ4951310.1
protea_cynaroides_KAJ4955603.1 protea_cynaroides protea_cynaroides_KAJ4955603.1
PruarS.5G139300.t1.p1_1 prunus_armeniaca PruarS.5G139300.t1.p1_1
Pav_sc0000886.1_g700.1.mk:mrna prunus_avium Pav_sc0000886.1_g700.1.mk:mrna
Pav_sc0007218.1_g040.1.mk:mrna prunus_avium Pav_sc0007218.1_g040.1.mk:mrna
prunus_campanulata_evm.model.Chr05.1333 prunus_campanulata prunus_campanulata_evm.model.Chr05.1333
prunus_domestica_Pd.00g042250.m01-v1.0 prunus_domestica prunus_domestica_Pd.00g042250.m01-v1.0
prunus_domestica_Pd.00g104690.m01-v1.0 prunus_domestica prunus_domestica_Pd.00g104690.m01-v1.0
prunus_domestica_Pd.00g606410.m01-v1.0 prunus_domestica prunus_domestica_Pd.00g606410.m01-v1.0
prunus_domestica_Pd.00g842850.m01-v1.0 prunus_domestica prunus_domestica_Pd.00g842850.m01-v1.0
prunus_domestica_Pd.00g874120.m01-v1.0 prunus_domestica prunus_domestica_Pd.00g874120.m01-v1.0
prunus_domestica_Pd.00g927660.m01-v1.0 prunus_domestica prunus_domestica_Pd.00g927660.m01-v1.0
Pdul05G0010380.1 prunus_dulcis Pdul05G0010380.1
prunus_ferganensis_Pfe05g1160 prunus_ferganensis prunus_ferganensis_Pfe05g1160
prunus_fruticosa_Athal_rna-NM_001334142.1_R0 prunus_fruticosa prunus_fruticosa_Athal_rna-NM_001334142.1_R0
prunus_fruticosa_Braker_braker1.g34589.t1 prunus_fruticosa prunus_fruticosa_Braker_braker1.g34589.t1
prunus_fruticosa_Braker_braker1.g34592.t1 prunus_fruticosa prunus_fruticosa_Braker_braker1.g34592.t1
prunus_fruticosa_Braker_braker2.g22641.t1 prunus_fruticosa prunus_fruticosa_Braker_braker2.g22641.t1
prunus_fruticosa_Fves_FvH4_5g03170.1_R0 prunus_fruticosa prunus_fruticosa_Fves_FvH4_5g03170.1_R0