PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
populus_euphratica_GWHPAAYU017952 populus_euphratica populus_euphratica_GWHPAAYU017952
populus_euphratica_GWHPAAYU037504 populus_euphratica populus_euphratica_GWHPAAYU037504
PglaA01G0035430.1 populus_glandulosa_x_p_alba PglaA01G0035430.1
PglaG01G0036400.1 populus_glandulosa_x_p_alba PglaG01G0036400.1
PglaG03G0009800.1 populus_glandulosa_x_p_alba PglaG03G0009800.1
Pglatig00004781_0_1863150052280.1 populus_glandulosa_x_p_alba Pglatig00004781_0_1863150052280.1
populus_ilicifolia_GWHPABKR000874 populus_ilicifolia populus_ilicifolia_GWHPABKR000874
populus_ilicifolia_GWHPABKR007275 populus_ilicifolia populus_ilicifolia_GWHPABKR007275
populus_ilicifolia_GWHPABKR011797 populus_ilicifolia populus_ilicifolia_GWHPABKR011797
Ppruscaffold1391070047500 populus_pruinosa Ppruscaffold1391070047500
Ppruscaffold7060299090 populus_pruinosa Ppruscaffold7060299090
Potra002545g19168.1 populus_tremula Potra002545g19168.1
Potra002545g19168.2 populus_tremula Potra002545g19168.2
Potra002545g19168.3 populus_tremula Potra002545g19168.3
Potra003229g21073.1 populus_tremula Potra003229g21073.1
Potra003229g21073.2 populus_tremula Potra003229g21073.2
populus_tremula_x_alba_PtXaTreH.01G082500.1.p populus_tremula_x_alba populus_tremula_x_alba_PtXaTreH.01G082500.1.p
populus_tremula_x_alba_PtXaTreH.03G109500.1.p populus_tremula_x_alba populus_tremula_x_alba_PtXaTreH.03G109500.1.p
PtremuloPotrs0087270158510.1.v1.427 populus_tremuloides PtremuloPotrs0087270158510.1.v1.427
PtremuloPotrs0175630247500.2.v1.427 populus_tremuloides PtremuloPotrs0175630247500.2.v1.427
Potri.001G099300.1.p populus_trichocarpa Potri.001G099300.1.p
Potri.003G132400.1.p populus_trichocarpa Potri.003G132400.1.p
populus_wilsonii_Pwi01G008840.1 populus_wilsonii populus_wilsonii_Pwi01G008840.1
populus_wilsonii_Pwi03G012830.1 populus_wilsonii populus_wilsonii_Pwi03G012830.1
Pcae1911910069750 porella_caespitans_var_nipponica Pcae1911910069750
Pcae2383300141700 porella_caespitans_var_nipponica Pcae2383300141700
Pchi1478750089340 porella_chinensis Pchi1478750089340
Ppla1573680005990 porella_platyphylla Ppla1573680005990
KAA8496986.1 porphyridium_purpureum KAA8496986.1
portulaca_amilis_FUN_018156-T1 portulaca_amilis portulaca_amilis_FUN_018156-T1