PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
poa_supina_sjg30492.t1 poa_supina poa_supina_sjg30492.t1
poa_supina_sjg55709.t1 poa_supina poa_supina_sjg55709.t1
Pmic1159540065120 pogonatum_microstomum Pmic1159540065120
Psubff8510211630 pogonatum_subfuscatum Psubff8510211630
Pcabscaffold_10580034120.1 pogostemon_cablin Pcabscaffold_10580034120.1
Pcabscaffold_114690070920.1 pogostemon_cablin Pcabscaffold_114690070920.1
Pcabscaffold_14630203480.1 pogostemon_cablin Pcabscaffold_14630203480.1
Pcabscaffold_14960216190.1 pogostemon_cablin Pcabscaffold_14960216190.1
Pcabscaffold_180321270.1 pogostemon_cablin Pcabscaffold_180321270.1
Pcabscaffold_2750548510.1 pogostemon_cablin Pcabscaffold_2750548510.1
Pcabscaffold_31370604400.1 pogostemon_cablin Pcabscaffold_31370604400.1
Pcabscaffold_3530655440.1 pogostemon_cablin Pcabscaffold_3530655440.1
Pcabscaffold_3790680180.1 pogostemon_cablin Pcabscaffold_3790680180.1
Pcabscaffold_380683670.1 pogostemon_cablin Pcabscaffold_380683670.1
Pcabscaffold_48980792350.1 pogostemon_cablin Pcabscaffold_48980792350.1
Pcabscaffold_540840560.1 pogostemon_cablin Pcabscaffold_540840560.1
Pcabscaffold_56_1-23225690858430.1 pogostemon_cablin Pcabscaffold_56_1-23225690858430.1
Pcabscaffold_7580976610.1 pogostemon_cablin Pcabscaffold_7580976610.1
Pcabscaffold_911064760.1 pogostemon_cablin Pcabscaffold_911064760.1
polygala_tenuifolia_Pt17G01889 polygala_tenuifolia polygala_tenuifolia_Pt17G01889
Palpscaffold_60156590 polytrichastrum_alpinum Palpscaffold_60156590
Palpscaffold_70191730 polytrichastrum_alpinum Palpscaffold_70191730
Pohi506680309960 polytrichastrum_ohioense Pohi506680309960
Pohi506690310210 polytrichastrum_ohioense Pohi506690310210
POcom2620081270 polytrichum_commune POcom2620081270
Pstr1731660091690 polytrichum_strictum Pstr1731660091690
poncirus_trifoliata_Pt3g002290.1 poncirus_trifoliata poncirus_trifoliata_Pt3g002290.1
GWHPAAEP026036 populus_alba GWHPAAEP026036
GWHPAAEP043928 populus_alba GWHPAAEP043928
populus_euphratica_GWHPAAYU003610 populus_euphratica populus_euphratica_GWHPAAYU003610