PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
PITA_000070150-RA pinus_taeda PITA_000070150-RA
PITA_000077699-RA pinus_taeda PITA_000077699-RA
PL03G0094260 piper_longum PL03G0094260
PL04G0122260 piper_longum PL04G0122260
Pnig08G0018600 piper_nigrum Pnig08G0018600
pistacia_chinensis_KAJ0007401.1 pistacia_chinensis pistacia_chinensis_KAJ0007401.1
pistacia_chinensis_KAJ0048038.1 pistacia_chinensis pistacia_chinensis_KAJ0048038.1
cds-EVM0018393.1 pistacia_vera cds-EVM0018393.1
Psat02G0041830.1 pisum_sativum Psat02G0041830.1
Psat02G0041830.2 pisum_sativum Psat02G0041830.2
Pappscaffold_50094880 plagiochasma_appendiculatum Pappscaffold_50094880
Psem4359420166500 plagiochila_semidecurrens Psem4359420166500
Psem4447690245610 plagiochila_semidecurrens Psem4447690245610
Pcil3105160181850 plagiomnium_ciliare Pcil3105160181850
plantago_major_evm.model.LG02.4040 plantago_major plantago_major_evm.model.LG02.4040
platycarya_strobilacea_PstrChr11G000715.1 platycarya_strobilacea platycarya_strobilacea_PstrChr11G000715.1
platycarya_strobilacea_PstrChr12G000542.1 platycarya_strobilacea platycarya_strobilacea_PstrChr12G000542.1
PLgraScaffold33000170270.2 platycodon_grandiflorus PLgraScaffold33000170270.2
PLgraScaffold4000201740.1 platycodon_grandiflorus PLgraScaffold4000201740.1
Psubu130018020 pleuridium_subulatum Psubu130018020
Psubu1320021680 pleuridium_subulatum Psubu1320021680
Psubu220103260 pleuridium_subulatum Psubu220103260
PLpurcontig_780435040 pleurozia_purpurea PLpurcontig_780435040
Phir2264230093770 plicanthus_hirtellus Phir2264230093770
Phir2280090164510 plicanthus_hirtellus Phir2280090164510
poa_annua_Pa024556-RA poa_annua poa_annua_Pa024556-RA
poa_annua_Pa031559-RA poa_annua poa_annua_Pa031559-RA
poa_annua_Pa060825-RA poa_annua poa_annua_Pa060825-RA
poa_infirma_ijg51684.t1 poa_infirma poa_infirma_ijg51684.t1
poa_infirma_ijg66154.t1 poa_infirma poa_infirma_ijg66154.t1