PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
petrea_volubilis_Petvo.10G004520.1 petrea_volubilis petrea_volubilis_Petvo.10G004520.1
Plae4008530132290 phaeoceros_laevis Plae4008530132290
Paphscaffold690242420.1 phalaenopsis_aphrodite Paphscaffold690242420.1
PequScaffold2123220360190 phalaenopsis_equestris PequScaffold2123220360190
PequScaffold2251710381300 phalaenopsis_equestris PequScaffold2251710381300
Pacu01G0025750.1 phaseolus_acutifolius Pacu01G0025750.1
Pacu02G0002560.1 phaseolus_acutifolius Pacu02G0002560.1
Plun02G0002810.1 phaseolus_lunatus Plun02G0002810.1
PHvul02G0016030.1 phaseolus_vulgaris PHvul02G0016030.1
phelipanche_aegyptiaca_GWHPBHPU006984 phelipanche_aegyptiaca phelipanche_aegyptiaca_GWHPBHPU006984
Pturscaffold_60260000 philonotis_turneriana Pturscaffold_60260000
PjapPjv1Scaffold_2830128120.1 phtheirospermum_japonicum PjapPjv1Scaffold_2830128120.1
PjapPjv1Scaffold_8000271970.1 phtheirospermum_japonicum PjapPjv1Scaffold_8000271970.1
Peduhic_scaffold_160156020.1 phyllostachys_edulis Peduhic_scaffold_160156020.1
Peduhic_scaffold_170199180.1 phyllostachys_edulis Peduhic_scaffold_170199180.1
Peduhic_scaffold_210268620.1 phyllostachys_edulis Peduhic_scaffold_210268620.1
Peduhic_scaffold_30382050.1 phyllostachys_edulis Peduhic_scaffold_30382050.1
Peduhic_scaffold_60427930.1 phyllostachys_edulis Peduhic_scaffold_60427930.1
Peduhic_scaffold_90491190.1 phyllostachys_edulis Peduhic_scaffold_90491190.1
physalis_grisea_Phygri01g021980.1 physalis_grisea physalis_grisea_Phygri01g021980.1
physalis_pruinosa_Phypru01g022250.1 physalis_pruinosa physalis_pruinosa_Phypru01g022250.1
Ppat03G0008810.1 physcomitrella_patens Ppat03G0008810.1
Ppat03G0008810.2 physcomitrella_patens Ppat03G0008810.2
Ppat03G0008810.3 physcomitrella_patens Ppat03G0008810.3
Ppat03G0008810.4 physcomitrella_patens Ppat03G0008810.4
Ppat03G0008810.5 physcomitrella_patens Ppat03G0008810.5
Ppat03G0008810.6 physcomitrella_patens Ppat03G0008810.6
Ppat03G0008810.7 physcomitrella_patens Ppat03G0008810.7
Ppat03G0008810.8 physcomitrella_patens Ppat03G0008810.8
PspPicochlorum_contig_450046280.1 picochlorum_sp PspPicochlorum_contig_450046280.1