PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
panax_japonicus_GWHPBEIH031310.1 panax_japonicus panax_japonicus_GWHPBEIH031310.1
panax_japonicus_GWHPBEIH069345.1 panax_japonicus panax_japonicus_GWHPBEIH069345.1
panax_quinquefolius_GWHPBEIR014911.1 panax_quinquefolius panax_quinquefolius_GWHPBEIR014911.1
panax_quinquefolius_GWHPBEIR034178.1 panax_quinquefolius panax_quinquefolius_GWHPBEIR034178.1
panax_quinquefolius_GWHPBEIR035622.1 panax_quinquefolius panax_quinquefolius_GWHPBEIR035622.1
panax_stipuleanatus_GWHPBEIJ005448.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ005448.1
panax_stipuleanatus_GWHPBEIJ029966.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ029966.1
panax_stipuleanatus_GWHPBEIJ034599.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ034599.1
panax_stipuleanatus_GWHPBEIJ036598.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ036598.1
panax_stipuleanatus_GWHPBEIJ038505.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ038505.1
Phal01G0028090.1 panicum_hallii Phal01G0028090.1
Phal05G0000320.1 panicum_hallii Phal05G0000320.1
Phal05G0028310.1 panicum_hallii Phal05G0028310.1
Pmil06G0010550.1 panicum_miliaceum Pmil06G0010550.1
Pmil08G0000400.1 panicum_miliaceum Pmil08G0000400.1
Pvir01KG0033190.1 panicum_virgatum Pvir01KG0033190.1
Pvir01NG0032420.1 panicum_virgatum Pvir01NG0032420.1
Pvir05KG0054270.1 panicum_virgatum Pvir05KG0054270.1
Pvir05NG0053800.1 panicum_virgatum Pvir05NG0053800.1
Papaver_setigerum_Pse15G05350.0 papaver_setigerum Papaver_setigerum_Pse15G05350.0
Papaver_setigerum_Pse16G17370.0 papaver_setigerum Papaver_setigerum_Pse16G17370.0
Papaver_setigerum_Pse17G04020.0 papaver_setigerum Papaver_setigerum_Pse17G04020.0
Psom08G0000130.1 papaver_somniferum Psom08G0000130.1
PeneHiC_scaffold_10026710 paraleucobryum_enerve PeneHiC_scaffold_10026710
paulownia_fortunei_KAI3453758.1 paulownia_fortunei paulownia_fortunei_KAI3453758.1
paulownia_fortunei_KAI3468687.1 paulownia_fortunei paulownia_fortunei_KAI3468687.1
PmarPM0016150063420.1 penium_margaritaceum PmarPM0016150063420.1
PmarPM0022320083550.1 penium_margaritaceum PmarPM0022320083550.1
PmarPM0078600216550.1 penium_margaritaceum PmarPM0078600216550.1
PmarPM0337310438770.1 penium_margaritaceum PmarPM0337310438770.1