PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Orhiscaffold34930164100.1 oryza_rhizomatis Orhiscaffold34930164100.1
Oruf01G0048520.1 oryza_rufipogon Oruf01G0048520.1
Oruf02G0029210.1 oryza_rufipogon Oruf02G0029210.1
Oruf03G0003810.2 oryza_rufipogon Oruf03G0003810.2
Oruf03G0003810.3 oryza_rufipogon Oruf03G0003810.3
Osat01G0052920.1 oryza_sativa Osat01G0052920.1
Osat02G0032240.1 oryza_sativa Osat02G0032240.1
OsatMH6301G0062150.1 oryza_sativa_spmh63 OsatMH6301G0062150.1
OsatMH6301G0070490.1 oryza_sativa_spmh63 OsatMH6301G0070490.1
OsatMH6302G0045080.1 oryza_sativa_spmh63 OsatMH6302G0045080.1
OsatMH6309G0010100.1 oryza_sativa_spmh63 OsatMH6309G0010100.1
OsatMH6312G0027730.1 oryza_sativa_spmh63 OsatMH6312G0027730.1
OsatZS9701G0070600.1 oryza_sativa_spzs97 OsatZS9701G0070600.1
OsatZS9702G0047860.1 oryza_sativa_spzs97 OsatZS9702G0047860.1
OsatZS9709G0010010.1 oryza_sativa_spzs97 OsatZS9709G0010010.1
OsatZS9712G0030930.1 oryza_sativa_spzs97 OsatZS9712G0030930.1
Oluc11G0000070.1 ostreococcus_lucimarinus Oluc11G0000070.1
XP_003081807.1 ostreococcus_tauri XP_003081807.1
ostrya_chinensis_OmuG0000716.1 ostrya_chinensis ostrya_chinensis_OmuG0000716.1
oxytropis_ochrocephala_EVM0016965.1 oxytropis_ochrocephala oxytropis_ochrocephala_EVM0016965.1
paeonia_ostii_Pos.gene20026.mRNA-1 paeonia_ostii paeonia_ostii_Pos.gene20026.mRNA-1
Pambctg015980_pilon_pilon_pilon0262080 pallavicinia_ambigua Pambctg015980_pilon_pilon_pilon0262080
Pg_S0285.3 panax_ginseng Pg_S0285.3
Pg_S1005.15 panax_ginseng Pg_S1005.15
Pg_S4369.6 panax_ginseng Pg_S4369.6
Pg_S7699.3 panax_ginseng Pg_S7699.3
panax_japonicus_GWHPBEIH009766.1 panax_japonicus panax_japonicus_GWHPBEIH009766.1
panax_japonicus_GWHPBEIH012300.1 panax_japonicus panax_japonicus_GWHPBEIH012300.1
panax_japonicus_GWHPBEIH028108.1 panax_japonicus panax_japonicus_GWHPBEIH028108.1
panax_japonicus_GWHPBEIH031298.1 panax_japonicus panax_japonicus_GWHPBEIH031298.1