PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
OB02G35230.1 oryza_brachyantha OB02G35230.1
oryza_coarctata_PC_02845 oryza_coarctata oryza_coarctata_PC_02845
oryza_coarctata_PC_22231 oryza_coarctata oryza_coarctata_PC_22231
oryza_coarctata_PC_24275 oryza_coarctata oryza_coarctata_PC_24275
oryza_coarctata_PC_27924 oryza_coarctata oryza_coarctata_PC_27924
ORGLA01G0391800.1 oryza_glaberrima ORGLA01G0391800.1
ORGLA02G0240000.1 oryza_glaberrima ORGLA02G0240000.1
Oglu01G0049270.1 oryza_glumaepatula Oglu01G0049270.1
Oglu02G0028150.1 oryza_glumaepatula Oglu02G0028150.1
oryza_glumipatula_OGLUM01G49800.1 oryza_glumipatula oryza_glumipatula_OGLUM01G49800.1
oryza_glumipatula_OGLUM02G28490.1 oryza_glumipatula oryza_glumipatula_OGLUM02G28490.1
KAF0933258.1 oryza_granulata KAF0933258.1
KAF0933627.1 oryza_granulata KAF0933627.1
AMDW01033803.1_FGP001 oryza_longistaminata AMDW01033803.1_FGP001
KN539016.1_FGP011 oryza_longistaminata KN539016.1_FGP011
KN539565.1_FGP006 oryza_longistaminata KN539565.1_FGP006
KN539772.1_FGP003 oryza_longistaminata KN539772.1_FGP003
OMERI01G42190.1 oryza_meridionalis OMERI01G42190.1
OMERI02G27100.1 oryza_meridionalis OMERI02G27100.1
ONIVA01G51700.1 oryza_nivara ONIVA01G51700.1
ONIVA02G31040.1 oryza_nivara ONIVA02G31040.1
OoffiChr01g04104.1 oryza_officinalis OoffiChr01g04104.1
OoffiChr02g02468.1 oryza_officinalis OoffiChr02g02468.1
OPUNC01G37580.1 oryza_punctata OPUNC01G37580.1
OPUNC01G37580.3 oryza_punctata OPUNC01G37580.3
OPUNC01G44360.1 oryza_punctata OPUNC01G44360.1
OPUNC01G44360.2 oryza_punctata OPUNC01G44360.2
OPUNC02G25650.1 oryza_punctata OPUNC02G25650.1
Orhiscaffold2440109910.1 oryza_rhizomatis Orhiscaffold2440109910.1
Orhiscaffold330155000.1 oryza_rhizomatis Orhiscaffold330155000.1