PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
NcolGWHAAYW000000020057550.1 nymphaea_colorata NcolGWHAAYW000000020057550.1
NcolGWHAAYW000000030064920.1 nymphaea_colorata NcolGWHAAYW000000030064920.1
NcolGWHAAYW000000090164660.1 nymphaea_colorata NcolGWHAAYW000000090164660.1
NcolGWHAAYW000000110194790.1 nymphaea_colorata NcolGWHAAYW000000110194790.1
nyssa_yunnanensis_augustus-291643-processed-gene-7.11-mRNA-1 nyssa_yunnanensis nyssa_yunnanensis_augustus-291643-processed-gene-7.11-mRNA-1
ochroma_pyramidale_OCHPYR01953_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR01953_OCHPYR
ochroma_pyramidale_OCHPYR05152_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR05152_OCHPYR
ochroma_pyramidale_OCHPYR32281_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR32281_OCHPYR
ochroma_pyramidale_OCHPYR41548_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR41548_OCHPYR
ocimum_basilicum_366092.g1.t1 ocimum_basilicum ocimum_basilicum_366092.g1.t1
ocimum_basilicum_380513.g12.t1 ocimum_basilicum ocimum_basilicum_380513.g12.t1
ocimum_sanctum_Ote100128240011 ocimum_sanctum ocimum_sanctum_Ote100128240011
Osph4970330200920 odontoschisma_sphagni Osph4970330200920
oldenlandia_corymbosa_CAI9094166.1 oldenlandia_corymbosa oldenlandia_corymbosa_CAI9094166.1
Oeur13G0007170.1 olea_europaea Oeur13G0007170.1
Olatscaffold3100189390 olyra_latifolia Olatscaffold3100189390
Olatscaffold3120189860 olyra_latifolia Olatscaffold3120189860
Olatscaffold490264850 olyra_latifolia Olatscaffold490264850
Olatscaffold890353770 olyra_latifolia Olatscaffold890353770
Opum11G0001310.1 ophiorrhiza_pumila Opum11G0001310.1
origanum_vulgare_639.g31.t1 origanum_vulgare origanum_vulgare_639.g31.t1
Oropetium_20150105_10065A oropetium_thomaeum Oropetium_20150105_10065A
Oropetium_20150105_21133A oropetium_thomaeum Oropetium_20150105_21133A
Oropetium_20150105_22166A oropetium_thomaeum Oropetium_20150105_22166A
orthotrichum_anomalum_jg21172.t1 orthotrichum_anomalum orthotrichum_anomalum_jg21172.t1
orthotrichum_anomalum_jg21306.t1 orthotrichum_anomalum orthotrichum_anomalum_jg21306.t1
OBART01G38840.1 oryza_barthii OBART01G38840.1
OBART01G45390.1 oryza_barthii OBART01G45390.1
OBART02G27930.1 oryza_barthii OBART02G27930.1
OB01G54600.1 oryza_brachyantha OB01G54600.1