PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pvir01KG0009360.1 Alkaloid 16OMT medium borderline
Pvir01NG0008500.1 Alkaloid 16OMT medium borderline
Pvir01NG0008510.1 Alkaloid 16OMT medium borderline
Pvir02NG0009620.1 Alkaloid 16OMT medium borderline
Pvir02NG0010270.1 Alkaloid 16OMT medium borderline
Pvir02NG0042180.1 Alkaloid 16OMT medium borderline
Pvir03KG0022730.1 Alkaloid 16OMT medium borderline
Pvir03KG0022750.1 Alkaloid 16OMT medium borderline
Pvir03KG0022760.1 Alkaloid 16OMT medium borderline
Pvir03KG0022780.1 Alkaloid 16OMT medium borderline
Pvir03KG0028250.1 Alkaloid 16OMT low borderline
Pvir03NG0021230.1 Alkaloid 16OMT medium borderline
Pvir03NG0021240.1 Alkaloid 16OMT medium borderline
Pvir03NG0021240.2 Alkaloid 16OMT medium borderline
Pvir03NG0021280.1 Alkaloid 16OMT medium borderline
Pvir03NG0032960.1 Alkaloid 16OMT medium borderline
Pvir03NG0035800.1 Alkaloid 16OMT medium borderline
Pvir03NG0035800.2 Alkaloid 16OMT medium borderline
Pvir04KG0020800.1 Alkaloid 16OMT low borderline
Pvir05KG0004540.1 Alkaloid 16OMT medium borderline
Pvir05KG0038280.1 Alkaloid 16OMT medium borderline
Pvir05NG0011730.1 Alkaloid 16OMT medium borderline
Pvir05NG0011730.2 Alkaloid 16OMT medium borderline
Pvir05NG0032980.1 Alkaloid 16OMT medium borderline
Pvir05NG0037460.1 Alkaloid 16OMT medium borderline
Pvir06KG0005420.1 Alkaloid 16OMT medium borderline
Pvir06KG0005420.2 Alkaloid 16OMT medium borderline
Pvir06KG0005420.3 Alkaloid 16OMT medium borderline
Pvir06KG0005420.5 Alkaloid 16OMT medium borderline
Pvir06KG0005420.6 Alkaloid 16OMT medium borderline
Pvir06KG0005420.7 Alkaloid 16OMT medium borderline
Pvir06KG0005420.8 Alkaloid 16OMT medium borderline
Pvir06KG0023030.1 Alkaloid 16OMT medium borderline
Pvir06NG0005560.1 Alkaloid 16OMT medium borderline
Pvir06NG0005560.3 Alkaloid 16OMT medium borderline
Pvir06NG0019080.1 Alkaloid 16OMT medium borderline
Pvir07KG0006600.1 Alkaloid 16OMT medium borderline
Pvir07KG0011550.1 Alkaloid 16OMT medium borderline
Pvir07NG0020740.1 Alkaloid 16OMT low borderline
Pvir08KG0019190.1 Alkaloid 16OMT medium borderline
Pvir08KG0019250.1 Alkaloid 16OMT medium borderline
Pvir08KG0019260.1 Alkaloid 16OMT medium borderline
Pvir08KG0021390.1 Alkaloid 16OMT medium borderline
Pvir08KG0026040.1 Alkaloid 16OMT medium borderline
Pvir08NG0010300.1 Alkaloid 16OMT medium borderline
Pvir08NG0011080.1 Alkaloid 16OMT medium borderline
Pvir08NG0016130.1 Alkaloid 16OMT medium borderline
Pvir08NG0016160.1 Alkaloid 16OMT medium borderline
Pvir08NG0016340.1 Alkaloid 16OMT medium borderline
Pvir08NG0016410.1 Alkaloid 16OMT medium borderline