PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Pvir01KG0006430.1 Alkaloid 7DLH medium borderline
Pvir01NG0005600.1 Alkaloid 7DLH medium borderline
Pvir01NG0034070.4 Alkaloid 7DLH low borderline
Pvir01NG0034070.5 Alkaloid 7DLH low borderline
Pvir02KG0025890.2 Alkaloid 7DLH medium borderline
Pvir03NG0030180.1 Alkaloid 7DLH medium borderline
Pvir04KG0021330.1 Alkaloid 7DLH medium borderline
Pvir04KG0021330.2 Alkaloid 7DLH medium borderline
Pvir04KG0028480.1 Alkaloid 7DLH medium borderline
Pvir05KG0001870.1 Alkaloid 7DLH low borderline
Pvir05KG0011590.1 Alkaloid 7DLH medium borderline
Pvir05KG0011590.2 Alkaloid 7DLH medium borderline
Pvir05KG0018190.1 Alkaloid 7DLH medium borderline
Pvir05KG0029310.3 Alkaloid 7DLH medium borderline
Pvir05NG0011590.1 Alkaloid 7DLH medium borderline
Pvir05NG0028190.4 Alkaloid 7DLH medium borderline
Pvir05NG0028190.5 Alkaloid 7DLH medium borderline
Pvir05NG0028200.2 Alkaloid 7DLH medium borderline
Pvir05NG0028200.3 Alkaloid 7DLH medium borderline
Pvir05NG0028210.4 Alkaloid 7DLH medium borderline
Pvir05NG0028260.1 Alkaloid 7DLH medium borderline
Pvir05NG0028340.1 Alkaloid 7DLH medium borderline
Pvir05NG0028340.2 Alkaloid 7DLH medium borderline
Pvir05NG0028340.3 Alkaloid 7DLH medium borderline
Pvir08KG0016740.1 Alkaloid 7DLH low borderline
Pvir08NG0013930.1 Alkaloid 7DLH low borderline
Pvir09KG0029330.2 Alkaloid 7DLH low borderline
Pvir09NG0028740.3 Alkaloid 7DLH low borderline
Pvir09NG0041850.3 Alkaloid 7DLH medium borderline