PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Pvir01KG0009680.1 Steroid CYP90D1 low borderline
Pvir01KG0009680.2 Steroid CYP90D1 low borderline
Pvir01KG0019290.1 Steroid CYP90D1 low borderline
Pvir01KG0024350.1 Steroid CYP90D1 medium borderline
Pvir01KG0024370.1 Steroid CYP90D1 medium borderline
Pvir01KG0024390.1 Steroid CYP90D1 medium borderline
Pvir01KG0025000.1 Steroid CYP90D1 medium borderline
Pvir01NG0018420.1 Steroid CYP90D1 low borderline
Pvir01NG0023720.1 Steroid CYP90D1 medium borderline
Pvir02KG0028060.1 Steroid CYP90D1 low borderline
Pvir02KG0040930.1 Steroid CYP90D1 medium borderline
Pvir02KG0040930.2 Steroid CYP90D1 medium borderline
Pvir02KG0046560.1 Steroid CYP90D1 low borderline
Pvir02KG0049770.1 Steroid CYP90D1 low borderline
Pvir02KG0051960.1 Steroid CYP90D1 low borderline
Pvir02NG0010840.1 Steroid CYP90D1 low borderline
Pvir02NG0015860.1 Steroid CYP90D1 low borderline
Pvir02NG0038090.1 Steroid CYP90D1 medium borderline
Pvir02NG0038100.1 Steroid CYP90D1 medium borderline
Pvir02NG0043210.1 Steroid CYP90D1 low borderline
Pvir02NG0046230.1 Steroid CYP90D1 low borderline
Pvir03KG0000990.1 Steroid CYP90D1 low borderline
Pvir03KG0001010.1 Steroid CYP90D1 low borderline
Pvir03KG0048360.1 Steroid CYP90D1 low borderline
Pvir03KG0052350.1 Steroid CYP90D1 low borderline
Pvir03NG0000580.1 Steroid CYP90D1 low borderline
Pvir03NG0000590.1 Steroid CYP90D1 low borderline
Pvir04KG0021490.1 Steroid CYP90D1 low borderline
Pvir04KG0028480.1 Steroid CYP90D1 low borderline
Pvir05KG0003430.1 Steroid CYP90D1 medium borderline
Pvir05KG0005080.1 Steroid CYP90D1 low borderline
Pvir05KG0005080.2 Steroid CYP90D1 low borderline
Pvir05KG0013040.1 Steroid CYP90D1 medium borderline
Pvir05KG0013050.1 Steroid CYP90D1 medium borderline
Pvir05NG0001080.1 Steroid CYP90D1 low borderline
Pvir05NG0003370.2 Steroid CYP90D1 medium borderline
Pvir05NG0005340.1 Steroid CYP90D1 low borderline
Pvir06KG0000420.1 Steroid CYP90D1 low borderline
Pvir06NG0004280.1 Steroid CYP90D1 low borderline
Pvir06NG0016440.1 Steroid CYP90D1 low borderline
Pvir07KG0018930.1 Steroid CYP90D1 medium borderline
Pvir07KG0018930.2 Steroid CYP90D1 medium borderline
Pvir07KG0018930.3 Steroid CYP90D1 medium borderline
Pvir07KG0027030.1 Steroid CYP90D1 medium borderline
Pvir07KG0027040.1 Steroid CYP90D1 medium borderline
Pvir07KG0034740.1 Steroid CYP90D1 low borderline
Pvir07NG0017000.1 Steroid CYP90D1 medium borderline
Pvir07NG0025210.1 Steroid CYP90D1 medium borderline
Pvir07NG0025340.1 Steroid CYP90D1 medium borderline
Pvir08KG0001170.1 Steroid CYP90D1 low borderline