PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Pvir01KG0007690.1 Alkaloid T3O medium borderline
Pvir01KG0007700.1 Alkaloid T3O medium borderline
Pvir01KG0007700.2 Alkaloid T3O medium borderline
Pvir01KG0007700.3 Alkaloid T3O medium borderline
Pvir01KG0007710.1 Alkaloid T3O medium borderline
Pvir01KG0007720.1 Alkaloid T3O medium borderline
Pvir01KG0007770.1 Alkaloid T3O medium borderline
Pvir01KG0007780.1 Alkaloid T3O medium borderline
Pvir01KG0011360.3 Alkaloid T3O low borderline
Pvir01KG0021210.1 Alkaloid T3O medium borderline
Pvir01KG0024350.1 Alkaloid T3O medium pass
Pvir01KG0024370.1 Alkaloid T3O medium pass
Pvir01KG0024390.1 Alkaloid T3O medium pass
Pvir01KG0024560.1 Alkaloid T3O medium borderline
Pvir01KG0025050.1 Alkaloid T3O medium borderline
Pvir01KG0025050.2 Alkaloid T3O medium borderline
Pvir01KG0025060.1 Alkaloid T3O medium borderline
Pvir01KG0026830.1 Alkaloid T3O medium pass
Pvir01KG0026830.2 Alkaloid T3O medium pass
Pvir01KG0032300.1 Alkaloid T3O low borderline
Pvir01KG0032900.1 Alkaloid T3O low borderline
Pvir01KG0035330.1 Alkaloid T3O medium pass
Pvir01KG0044330.1 Alkaloid T3O low borderline
Pvir01NG0000550.1 Alkaloid T3O medium pass
Pvir01NG0000550.2 Alkaloid T3O medium pass
Pvir01NG0006770.1 Alkaloid T3O medium borderline
Pvir01NG0006900.1 Alkaloid T3O medium borderline
Pvir01NG0010120.3 Alkaloid T3O low borderline
Pvir01NG0019740.1 Alkaloid T3O medium borderline
Pvir01NG0019890.1 Alkaloid T3O medium borderline
Pvir01NG0019900.1 Alkaloid T3O medium borderline
Pvir01NG0019900.2 Alkaloid T3O medium borderline
Pvir01NG0023970.1 Alkaloid T3O medium borderline
Pvir01NG0024400.1 Alkaloid T3O medium borderline
Pvir01NG0024470.1 Alkaloid T3O medium borderline
Pvir01NG0025460.1 Alkaloid T3O medium borderline
Pvir01NG0026320.1 Alkaloid T3O medium pass
Pvir01NG0031560.1 Alkaloid T3O low borderline
Pvir01NG0032170.1 Alkaloid T3O low borderline
Pvir01NG0034070.1 Alkaloid T3O medium pass
Pvir01NG0034070.2 Alkaloid T3O medium pass
Pvir01NG0034070.3 Alkaloid T3O medium pass
Pvir01NG0042760.1 Alkaloid T3O medium pass
Pvir01NG0042760.2 Alkaloid T3O medium pass
Pvir02KG0000490.1 Alkaloid T3O low borderline
Pvir02KG0007610.1 Alkaloid T3O medium borderline
Pvir02KG0007620.1 Alkaloid T3O medium borderline
Pvir02KG0013790.1 Alkaloid T3O medium borderline
Pvir02KG0018070.1 Alkaloid T3O medium borderline
Pvir02KG0018070.2 Alkaloid T3O medium borderline