PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Pvir01KG0001780.1 Rosmarinic Acid RAS low borderline
Pvir01KG0017840.1 Rosmarinic Acid RAS low borderline
Pvir01KG0027890.1 Rosmarinic Acid RAS medium pass
Pvir01KG0027890.2 Rosmarinic Acid RAS medium pass
Pvir01KG0045680.1 Rosmarinic Acid RAS low borderline
Pvir01NG0001550.1 Rosmarinic Acid RAS low borderline
Pvir01NG0016790.1 Rosmarinic Acid RAS low borderline
Pvir01NG0027570.1 Rosmarinic Acid RAS medium pass
Pvir01NG0041140.1 Rosmarinic Acid RAS medium pass
Pvir01NG0044040.1 Rosmarinic Acid RAS low borderline
Pvir02KG0014750.1 Rosmarinic Acid RAS medium pass
Pvir02KG0026800.1 Rosmarinic Acid RAS medium pass
Pvir02KG0036270.1 Rosmarinic Acid RAS medium pass
Pvir02NG0017000.1 Rosmarinic Acid RAS medium pass
Pvir02NG0033380.1 Rosmarinic Acid RAS medium pass
Pvir03KG0005190.1 Rosmarinic Acid RAS medium pass
Pvir03KG0007640.1 Rosmarinic Acid RAS low borderline
Pvir03KG0007640.2 Rosmarinic Acid RAS low borderline
Pvir03KG0011620.1 Rosmarinic Acid RAS low borderline
Pvir03KG0014600.1 Rosmarinic Acid RAS low borderline
Pvir03KG0014600.2 Rosmarinic Acid RAS low borderline
Pvir03KG0014600.3 Rosmarinic Acid RAS medium pass
Pvir03KG0015000.1 Rosmarinic Acid RAS low borderline
Pvir03KG0022940.1 Rosmarinic Acid RAS low borderline
Pvir03KG0039340.1 Rosmarinic Acid RAS medium pass
Pvir03KG0039350.1 Rosmarinic Acid RAS medium pass
Pvir03KG0039380.1 Rosmarinic Acid RAS medium pass
Pvir03KG0039380.2 Rosmarinic Acid RAS low borderline
Pvir03KG0039390.1 Rosmarinic Acid RAS medium pass
Pvir03KG0039390.2 Rosmarinic Acid RAS low borderline
Pvir03KG0047510.1 Rosmarinic Acid RAS low borderline
Pvir03NG0004120.1 Rosmarinic Acid RAS medium pass
Pvir03NG0010480.1 Rosmarinic Acid RAS low borderline
Pvir03NG0010480.2 Rosmarinic Acid RAS low borderline
Pvir03NG0010480.3 Rosmarinic Acid RAS low borderline
Pvir03NG0013280.1 Rosmarinic Acid RAS low borderline
Pvir03NG0013280.2 Rosmarinic Acid RAS low borderline
Pvir03NG0013690.1 Rosmarinic Acid RAS low borderline
Pvir03NG0021490.1 Rosmarinic Acid RAS low borderline
Pvir03NG0035900.1 Rosmarinic Acid RAS medium pass
Pvir03NG0036130.1 Rosmarinic Acid RAS medium pass
Pvir03NG0036130.2 Rosmarinic Acid RAS medium pass
Pvir03NG0043240.1 Rosmarinic Acid RAS low borderline
Pvir03NG0043240.2 Rosmarinic Acid RAS low borderline
Pvir04KG0001820.1 Rosmarinic Acid RAS medium pass
Pvir04KG0001820.2 Rosmarinic Acid RAS medium pass
Pvir04KG0001820.3 Rosmarinic Acid RAS medium pass
Pvir04KG0007520.1 Rosmarinic Acid RAS medium pass
Pvir04KG0011210.1 Rosmarinic Acid RAS low borderline
Pvir04KG0011210.2 Rosmarinic Acid RAS low borderline