PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
Reset
Gene Pathway Family Confidence Status Best Target
Pvir01KG0029520.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pvir02KG0037640.1 Rosmarinic Acid CPR medium pass CPR__00005__sp_Q653S9_NCPR3_ORYSJ
Pvir02NG0034760.1 Rosmarinic Acid CPR medium pass CPR__00005__sp_Q653S9_NCPR3_ORYSJ
Pvir02NG0034760.2 Rosmarinic Acid CPR medium pass CPR__00005__sp_Q653S9_NCPR3_ORYSJ
Pvir02NG0034760.3 Rosmarinic Acid CPR medium pass CPR__00005__sp_Q653S9_NCPR3_ORYSJ
Pvir02NG0034760.4 Rosmarinic Acid CPR medium pass CPR__00005__sp_Q653S9_NCPR3_ORYSJ
Pvir03KG0034890.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pvir03NG0032000.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pvir03NG0032000.2 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Pvir05KG0036780.1 Rosmarinic Acid CPR low borderline CPR__00004__sp_Q0J705_NCPR2_ORYSJ
Pvir05KG0036780.2 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Pvir05NG0035730.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Pvir06KG0003290.1 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Pvir06KG0003290.2 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Pvir06KG0012210.1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Pvir06NG0003260.1 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Pvir06NG0003260.2 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Pvir06NG0011760.1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Pvir06NG0011760.2 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Pvir06NG0011760.3 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Pvir06NG0011760.4 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Pvir07KG0034000.1 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir07KG0034000.2 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir07KG0034000.3 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir07KG0034000.4 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir07NG0032320.1 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir07NG0032320.2 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir08KG0006510.1 Rosmarinic Acid CPR low borderline CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir08KG0006510.2 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir08KG0006510.3 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
Pvir09KG0033480.1 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN