PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
Reset
Gene Pathway Family Confidence Status
Pvir01KG0040790.3 Alkaloid H6H medium borderline
Pvir01KG0040790.4 Alkaloid H6H medium borderline
Pvir01KG0040790.5 Alkaloid H6H medium borderline
Pvir01KG0044490.2 Alkaloid H6H medium pass
Pvir01NG0039640.2 Alkaloid H6H medium borderline
Pvir01NG0039640.3 Alkaloid H6H medium borderline
Pvir01NG0042930.2 Alkaloid H6H low borderline
Pvir02KG0000260.1 Alkaloid H6H medium pass
Pvir02KG0017510.1 Alkaloid H6H medium pass
Pvir02KG0028750.1 Alkaloid H6H medium borderline
Pvir02NG0000220.1 Alkaloid H6H medium pass
Pvir02NG0004840.1 Alkaloid H6H medium pass
Pvir02NG0015260.1 Alkaloid H6H low borderline
Pvir02NG0020590.1 Alkaloid H6H low borderline
Pvir02NG0025870.2 Alkaloid H6H medium borderline
Pvir02NG0025890.3 Alkaloid H6H medium borderline
Pvir03KG0006790.1 Alkaloid H6H medium borderline
Pvir03KG0011020.1 Alkaloid H6H medium borderline
Pvir03KG0014490.1 Alkaloid H6H medium pass
Pvir03KG0017950.1 Alkaloid H6H low borderline
Pvir03KG0017950.2 Alkaloid H6H low borderline
Pvir03KG0017950.3 Alkaloid H6H low borderline
Pvir03KG0017950.4 Alkaloid H6H low borderline
Pvir03KG0017970.1 Alkaloid H6H low borderline
Pvir03KG0022830.1 Alkaloid H6H low borderline
Pvir03KG0037010.1 Alkaloid H6H low borderline
Pvir03KG0043510.1 Alkaloid H6H medium pass
Pvir03NG0005820.1 Alkaloid H6H medium borderline
Pvir03NG0007390.2 Alkaloid H6H low borderline
Pvir03NG0009950.1 Alkaloid H6H medium borderline
Pvir03NG0009950.2 Alkaloid H6H medium borderline
Pvir03NG0016620.1 Alkaloid H6H low borderline
Pvir03NG0021350.1 Alkaloid H6H low borderline
Pvir03NG0027440.1 Alkaloid H6H medium pass
Pvir03NG0027440.2 Alkaloid H6H medium pass
Pvir03NG0027440.3 Alkaloid H6H low borderline
Pvir04KG0001970.1 Alkaloid H6H low borderline
Pvir04KG0006750.1 Alkaloid H6H low borderline
Pvir04KG0006780.1 Alkaloid H6H low borderline
Pvir04KG0022100.1 Alkaloid H6H low borderline
Pvir04KG0022100.2 Alkaloid H6H low borderline
Pvir04KG0022120.1 Alkaloid H6H low borderline
Pvir04KG0022120.2 Alkaloid H6H low borderline
Pvir04KG0022130.1 Alkaloid H6H low borderline
Pvir04KG0026860.1 Alkaloid H6H medium borderline
Pvir04KG0032480.1 Alkaloid H6H low borderline
Pvir04KG0032480.2 Alkaloid H6H low borderline
Pvir04NG0001630.1 Alkaloid H6H low borderline
Pvir04NG0008200.1 Alkaloid H6H low borderline
Pvir04NG0028950.1 Alkaloid H6H low borderline