PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
syzygium_aromaticum_saro009814-1.1 syzygium_aromaticum syzygium_aromaticum_saro009814-1.1
syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2862.mRNA1 syzygium_grande syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2862.mRNA1
syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2865.mRNA1 syzygium_grande syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.2865.mRNA1
tagetes_erecta_GWHPDOCX013482 tagetes_erecta tagetes_erecta_GWHPDOCX013482
TlepHiC_scaffold_20039600 takakia_lepidozioides TlepHiC_scaffold_20039600
TlepHiC_scaffold_40140080 takakia_lepidozioides TlepHiC_scaffold_40140080
tamarix_chinensis_TC01G3201T1 tamarix_chinensis tamarix_chinensis_TC01G3201T1
tapiscia_sinensis_evm.model.scaf_53.63 tapiscia_sinensis tapiscia_sinensis_evm.model.scaf_53.63
tapiscia_sinensis_evm.model.scaf_68.264 tapiscia_sinensis tapiscia_sinensis_evm.model.scaf_68.264
TkokGWHAAAA000049180100170.1 taraxacum_kok_saghyz TkokGWHAAAA000049180100170.1
TchiHiC_scaffold_50274050.1 taxus_chinensis TchiHiC_scaffold_50274050.1
TchiHiC_scaffold_90439460.1 taxus_chinensis TchiHiC_scaffold_90439460.1
tectona_grandis_Tg16g04860.t1 tectona_grandis tectona_grandis_Tg16g04860.t1
tectona_grandis_Tg18g13340.t1 tectona_grandis tectona_grandis_Tg18g13340.t1
tectona_grandis_Tg18g13700.t1 tectona_grandis tectona_grandis_Tg18g13700.t1
PNH09948.1_tsocial tetrabaena_socialis PNH09948.1_tsocial
KAF8389347.1 tetracentron_sinense KAF8389347.1
KAF8412190.1 tetracentron_sinense KAF8412190.1
tetraena_mongolica_TmoA01G029760.1 tetraena_mongolica tetraena_mongolica_TmoA01G029760.1
tetraena_mongolica_TmoA03G016930.1 tetraena_mongolica tetraena_mongolica_TmoA03G016930.1
tetraena_mongolica_TmoB01G028650.1 tetraena_mongolica tetraena_mongolica_TmoB01G028650.1
tetraena_mongolica_TmoB04G011520.1 tetraena_mongolica tetraena_mongolica_TmoB04G011520.1
Tfil1630120006450 tetralophozia_filiformis Tfil1630120006450
Tfil2302800174840 tetralophozia_filiformis Tfil2302800174840
Tpelscaffold_50107730 tetraphis_pellucida Tpelscaffold_50107730
KAF5179255.1[Thalictrum thalictrum_thalictroides KAF5179255.1[Thalictrum
KAF5200777.1[Thalictrum thalictrum_thalictroides KAF5200777.1[Thalictrum
THsancontig_520468340 thamnobryum_sandei THsancontig_520468340
Tcac03G0026230.1 theobroma_cacao Tcac03G0026230.1
thinopyrum_elongatum_GWHPABKY034654 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY034654