PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
TarvThla_scaffold170097900.1 thlaspi_arvense TarvThla_scaffold170097900.1
TarvThla_scaffold30201720.1 thlaspi_arvense TarvThla_scaffold30201720.1
tiarella_polyphylla_GWHPBKAH013394 tiarella_polyphylla tiarella_polyphylla_GWHPBKAH013394
Tmegctg010140_pilon_pilon_pilon0176370 timmia_megapolitana Tmegctg010140_pilon_pilon_pilon0176370
TOsin19G0002140 toona_sinensis TOsin19G0002140
TOsin20G0011370 toona_sinensis TOsin20G0011370
trapa_bicornis_GWHPBOVS012299 trapa_bicornis trapa_bicornis_GWHPBOVS012299
trapa_incisa_GWHPCBIN012461 trapa_incisa trapa_incisa_GWHPCBIN012461
PON97772.1[Trema trema_orientale PON97772.1[Trema
Treubia10380001640 treubia Treubia10380001640
Treubia4091760156130 treubia Treubia4091760156130
Tpra02G0034710.1 trifolium_pratense Tpra02G0034710.1
trifolium_subterranum_Ts_v2.0_19553.1 trifolium_subterranum trifolium_subterranum_Ts_v2.0_19553.1
XP_038687006.1[Tripterygium tripterygium_wilfordii XP_038687006.1[Tripterygium
TraesCS4B02G155400.1 triticum_aestivum TraesCS4B02G155400.1
TraesCS6A02G258500.1 triticum_aestivum TraesCS6A02G258500.1
TraesCS6D02G239700.1 triticum_aestivum TraesCS6D02G239700.1
triticum_monococcum_Tm.TA10622.r1.6AG0098730.1 triticum_monococcum triticum_monococcum_Tm.TA10622.r1.6AG0098730.1
Ttur4BG0014800.1 triticum_turgidum Ttur4BG0014800.1
Ttur4BG0014800.2 triticum_turgidum Ttur4BG0014800.2
Ttur4BG0014800.3 triticum_turgidum Ttur4BG0014800.3
Ttur4BG0014800.4 triticum_turgidum Ttur4BG0014800.4
Ttur4BG0014800.5 triticum_turgidum Ttur4BG0014800.5
Ttur6AG0022440.1 triticum_turgidum Ttur6AG0022440.1
Ttur6BG0024580.1 triticum_turgidum Ttur6BG0024580.1
Texs5820230920 tritomaria_exsectiformis Texs5820230920
evm.model.group0.3615 trochodendron_aralioides evm.model.group0.3615
evm.model.group0.3616 trochodendron_aralioides evm.model.group0.3616
evm.model.group1.220 trochodendron_aralioides evm.model.group1.220
evm.model.group17.719 trochodendron_aralioides evm.model.group17.719