MDS/IspF

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
KAG8071861.1[Zizania	zizania_palustris	KAG8071861.1[Zizania
XP_015896455.1[Ziziphus	ziziphus_jujuba	XP_015896455.1[Ziziphus
XP_015896465.1[Ziziphus	ziziphus_jujuba	XP_015896465.1[Ziziphus
Zmar01G0036840.1	zostera_marina	Zmar01G0036840.1
Zmarscaffold_7G0001010.1	zostera_marina	Zmarscaffold_7G0001010.1
ZjapZjn_sc00007.10091470	zoysia_japonica	ZjapZjn_sc00007.10091470
ZjapZjn_sc00022.10222590	zoysia_japonica	ZjapZjn_sc00022.10222590
ZjapZjn_sc00034.10280580	zoysia_japonica	ZjapZjn_sc00034.10280580
zoysia_matrella_Zmw_sc00641.1.g00030.1.sm.mk	zoysia_matrella	zoysia_matrella_Zmw_sc00641.1.g00030.1.sm.mk
zoysia_matrella_Zmw_sc00834.1.g00070.1.sm.mkhc	zoysia_matrella	zoysia_matrella_Zmw_sc00834.1.g00070.1.sm.mkhc
zoysia_matrella_Zmw_sc02154.1.g00160.1.sm.mk	zoysia_matrella	zoysia_matrella_Zmw_sc02154.1.g00160.1.sm.mk
ZPZ_r1.0_Zpz_sc00142.1.g00700.1.sm.mk	zoysia_pacifica	ZPZ_r1.0_Zpz_sc00142.1.g00700.1.sm.mk
ZPZ_r1.0_Zpz_sc01411.1.g00070.1.sm.mk	zoysia_pacifica	ZPZ_r1.0_Zpz_sc01411.1.g00070.1.sm.mk