PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
vitis_labrusca_maker-2-augustus-gene-2.42-mRNA-1 vitis_labrusca vitis_labrusca_maker-2-augustus-gene-2.42-mRNA-1
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g002850.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g002850.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g002860.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr01.ver1.0.g002860.p01
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g019210.p01 vitis_rupestris_x_riparia vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr02.ver1.0.g019210.p01
VIT_02s0025g00370.t01 vitis_vinifera VIT_02s0025g00370.t01
VIT_02s0025g00380.t01 vitis_vinifera VIT_02s0025g00380.t01
Vcarscaffold_60119630.1 volvox_carteri Vcarscaffold_60119630.1
warburgia_ugandensis_GWHPDQZE012401 warburgia_ugandensis warburgia_ugandensis_GWHPDQZE012401
warburgia_ugandensis_GWHPDQZE013909 warburgia_ugandensis warburgia_ugandensis_GWHPDQZE013909
Wmir01G0005700 welwitschia_mirabilis Wmir01G0005700
wurfbainia_longiligularis_WL01Gene25721 wurfbainia_longiligularis wurfbainia_longiligularis_WL01Gene25721
wurfbainia_longiligularis_WL01Gene35667 wurfbainia_longiligularis wurfbainia_longiligularis_WL01Gene35667
wurfbainia_villosa_Wv_033570.m1 wurfbainia_villosa wurfbainia_villosa_Wv_033570.m1
wurfbainia_villosa_Wv_062492.m8 wurfbainia_villosa wurfbainia_villosa_Wv_062492.m8
Xsor11G0006110.1 xanthoceras_sorbifolium Xsor11G0006110.1
zantedeschia_elliottiana_Zh02G145000.1 zantedeschia_elliottiana zantedeschia_elliottiana_Zh02G145000.1
zanthoxylum_bungeanum_ZbB_C12.Contig31a.95 zanthoxylum_bungeanum zanthoxylum_bungeanum_ZbB_C12.Contig31a.95
zanthoxylum_bungeanum_ZbB_C12.Contig95.83 zanthoxylum_bungeanum zanthoxylum_bungeanum_ZbB_C12.Contig95.83
zanthoxylum_bungeanum_ZbB_C14.Contig219.128 zanthoxylum_bungeanum zanthoxylum_bungeanum_ZbB_C14.Contig219.128
zanthoxylum_bungeanum_ZbC_C12.Contig7.9.91 zanthoxylum_bungeanum zanthoxylum_bungeanum_ZbC_C12.Contig7.9.91
zanthoxylum_bungeanum_ZbC_C14.Contig834.38 zanthoxylum_bungeanum zanthoxylum_bungeanum_ZbC_C14.Contig834.38
Zmay04G0020670.1 zea_mays Zmay04G0020670.1
Zmay04G0020670.2 zea_mays Zmay04G0020670.2
Zmay04G0020670.3 zea_mays Zmay04G0020670.3
Zmay04G0020670.4 zea_mays Zmay04G0020670.4
Zmay05G0036810.1 zea_mays Zmay05G0036810.1
KAG8044257.1[Zizania zizania_palustris KAG8044257.1[Zizania
KAG8047964.1[Zizania zizania_palustris KAG8047964.1[Zizania
KAG8059872.1[Zizania zizania_palustris KAG8059872.1[Zizania
KAG8065873.1[Zizania zizania_palustris KAG8065873.1[Zizania