PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
BpenContig510202760.1 betula_pendula BpenContig510202760.1
BpenContig5520216460.1 betula_pendula BpenContig5520216460.1
BpenContig9900280310.1 betula_pendula BpenContig9900280310.1
Bpusscaffold_10013690 blasia_pusilla Bpusscaffold_10013690
Bpusscaffold_130028340 blasia_pusilla Bpusscaffold_130028340
Bpusscaffold_20043430 blasia_pusilla Bpusscaffold_20043430
Bpusscaffold_30066850 blasia_pusilla Bpusscaffold_30066850
Bpusscaffold_50110030 blasia_pusilla Bpusscaffold_50110030
Bpusscaffold_80170840 blasia_pusilla Bpusscaffold_80170840
Bpusscaffold_80177960 blasia_pusilla Bpusscaffold_80177960
Boea_hygrometrica_lcl|KV006412.1_cds_KZV32598.1_26236 boea_hygrometrica Boea_hygrometrica_lcl|KV006412.1_cds_KZV32598.1_26236
Boea_hygrometrica_lcl|KV011785.1_cds_KZV26171.1_32683 boea_hygrometrica Boea_hygrometrica_lcl|KV011785.1_cds_KZV26171.1_32683
Boea_hygrometrica_lcl|KV011790.1_cds_KZV26061.1_32798 boea_hygrometrica Boea_hygrometrica_lcl|KV011790.1_cds_KZV26061.1_32798
Boea_hygrometrica_lcl|KV020099.1_cds_KZV15418.1_43409 boea_hygrometrica Boea_hygrometrica_lcl|KV020099.1_cds_KZV15418.1_43409
Boea_hygrometrica_lcl|KV020120.1_cds_KZV15145.1_43699 boea_hygrometrica Boea_hygrometrica_lcl|KV020120.1_cds_KZV15145.1_43699
BOERETT00009947 boechera_retrofracta BOERETT00009947
BOERETT00010348 boechera_retrofracta BOERETT00010348
BOERETT00014575 boechera_retrofracta BOERETT00014575
BOERETT00014580 boechera_retrofracta BOERETT00014580
BOERETT00015612 boechera_retrofracta BOERETT00015612
BOERETT00017160 boechera_retrofracta BOERETT00017160
BOERETT00023198 boechera_retrofracta BOERETT00023198
BOERETT00026473 boechera_retrofracta BOERETT00026473
BOERETT00043607 boechera_retrofracta BOERETT00043607
BOERETT00053920 boechera_retrofracta BOERETT00053920
BOERETT00056920 boechera_retrofracta BOERETT00056920
BOERETT00057673 boechera_retrofracta BOERETT00057673
BOERETT00060985 boechera_retrofracta BOERETT00060985
BOERETT00061854 boechera_retrofracta BOERETT00061854
BceiScaffold1400085660 bombax_ceiba BceiScaffold1400085660