PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
jgi|Chlsc1|16246|g8796.t1 chlamydomonas_schloesseri jgi|Chlsc1|16246|g8796.t1
Cses02G0030550.1 chloranthus_sessilifolius Cses02G0030550.1
Cses03G0021900.1 chloranthus_sessilifolius Cses03G0021900.1
Cses03G0021920.1 chloranthus_sessilifolius Cses03G0021920.1
Cses03G0021930.1 chloranthus_sessilifolius Cses03G0021930.1
Cses03G0021950.1 chloranthus_sessilifolius Cses03G0021950.1
Cses03G0022000.1 chloranthus_sessilifolius Cses03G0022000.1
Cses03G0022010.1 chloranthus_sessilifolius Cses03G0022010.1
Cses03G0022030.1 chloranthus_sessilifolius Cses03G0022030.1
Cses03G0022050.1 chloranthus_sessilifolius Cses03G0022050.1
Cses04G0018750.1 chloranthus_sessilifolius Cses04G0018750.1
Cses05G0002150.1 chloranthus_sessilifolius Cses05G0002150.1
Cses12G0001020.1 chloranthus_sessilifolius Cses12G0001020.1
Cses14G0005860.1 chloranthus_sessilifolius Cses14G0005860.1
Cacid2104200045140 chorisodontium_acidophyllum Cacid2104200045140
Cacid2341500091510 chorisodontium_acidophyllum Cacid2341500091510
Cacid2388470110980 chorisodontium_acidophyllum Cacid2388470110980
Cacid2412600127350 chorisodontium_acidophyllum Cacid2412600127350
Cacid2453750164040 chorisodontium_acidophyllum Cacid2453750164040
Cacid2473790193270 chorisodontium_acidophyllum Cacid2473790193270
Cacid2475900195110 chorisodontium_acidophyllum Cacid2475900195110
Cacid2482520212680 chorisodontium_acidophyllum Cacid2482520212680
Cacid2483870214170 chorisodontium_acidophyllum Cacid2483870214170
Cacid2516430283800 chorisodontium_acidophyllum Cacid2516430283800
Cacid2517330286250 chorisodontium_acidophyllum Cacid2517330286250
Cacid2523970301470 chorisodontium_acidophyllum Cacid2523970301470
Cacipscaffold_100000630 chorisodontium_aciphyllum Cacipscaffold_100000630
Cacipscaffold_1540032660 chorisodontium_aciphyllum Cacipscaffold_1540032660
Cacipscaffold_1570033300 chorisodontium_aciphyllum Cacipscaffold_1570033300
Cacipscaffold_1600038570 chorisodontium_aciphyllum Cacipscaffold_1600038570