PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
CLchi10G0006960.1 cladopus_chinensis CLchi10G0006960.1
CLchi10G0009850.1 cladopus_chinensis CLchi10G0009850.1
CLchi17G0004320.1 cladopus_chinensis CLchi17G0004320.1
CsonA1G0030990.1 cleistogenes_songorica CsonA1G0030990.1
CsonA1G0031000.1 cleistogenes_songorica CsonA1G0031000.1
CsonA1G0031010.1 cleistogenes_songorica CsonA1G0031010.1
CsonA4G0018320.1 cleistogenes_songorica CsonA4G0018320.1
CsonA5G0011480.1 cleistogenes_songorica CsonA5G0011480.1
CsonA5G0011490.1 cleistogenes_songorica CsonA5G0011490.1
CsonB1G0027070.1 cleistogenes_songorica CsonB1G0027070.1
CsonB1G0027080.1 cleistogenes_songorica CsonB1G0027080.1
CsonB1G0027090.1 cleistogenes_songorica CsonB1G0027090.1
CsonB1G0027100.1 cleistogenes_songorica CsonB1G0027100.1
CsonB2G0011350.1 cleistogenes_songorica CsonB2G0011350.1
CsonB2G0011360.1 cleistogenes_songorica CsonB2G0011360.1
CsonB4G0016810.1 cleistogenes_songorica CsonB4G0016810.1
Carb943920090510.1 clethra_arborea Carb943920090510.1
Carb966050161530.1 clethra_arborea Carb966050161530.1
Carb985240269840.1 clethra_arborea Carb985240269840.1
Carb988540290160.1 clethra_arborea Carb988540290160.1
Carb988540290170.1 clethra_arborea Carb988540290170.1
CLame618030014580 climacium_americanum CLame618030014580
CLame635670017540 climacium_americanum CLame635670017540
CLame644640022200 climacium_americanum CLame644640022200
CLame644640022220 climacium_americanum CLame644640022220
CLame648320026490 climacium_americanum CLame648320026490
CLame648650027290 climacium_americanum CLame648650027290
CLame649250028490 climacium_americanum CLame649250028490
CLame654390042100 climacium_americanum CLame654390042100
CLame655780048710 climacium_americanum CLame655780048710