TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
Rgu008986	raddia_guianensis	Rgu008986
Rgu011444	raddia_guianensis	Rgu011444
Rgu012730	raddia_guianensis	Rgu012730
raphanus_raphanistrum_GWHPANWN003212	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN003212
raphanus_raphanistrum_GWHPANWN021604	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN021604
raphanus_raphanistrum_GWHPANWN029499	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN029499
raphanus_raphanistrum_GWHPANWN044484	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN044484
Rsat05G0019690	raphanus_sativus	Rsat05G0019690
Rsat08G0022090	raphanus_sativus	Rsat08G0022090
Rsat09G0003830	raphanus_sativus	Rsat09G0003830
Rser1546180019770	regmatodon_serrulatus	Rser1546180019770
Rser1562150035670	regmatodon_serrulatus	Rser1562150035670
Rser1579220095180	regmatodon_serrulatus	Rser1579220095180
Rser1581390122410	regmatodon_serrulatus	Rser1581390122410
Rser1583330159560	regmatodon_serrulatus	Rser1583330159560
Rser1585460213630	regmatodon_serrulatus	Rser1585460213630
Rser1585460213640	regmatodon_serrulatus	Rser1585460213640
rheum_tanguticum_RtaG0017806.1	rheum_tanguticum	rheum_tanguticum_RtaG0017806.1
rheum_tanguticum_RtaG0038434.1	rheum_tanguticum	rheum_tanguticum_RtaG0038434.1
rheum_tanguticum_RtaG0044670.1	rheum_tanguticum	rheum_tanguticum_RtaG0044670.1
rhizophora_apiculata_RA_14622	rhizophora_apiculata	rhizophora_apiculata_RA_14622
rhizophora_apiculata_RA_17944	rhizophora_apiculata	rhizophora_apiculata_RA_17944
rhizophora_apiculata_RA_21038	rhizophora_apiculata	rhizophora_apiculata_RA_21038
Rcrescaffold1391560142530	rhodiola_crenulata	Rcrescaffold1391560142530
Rcrescaffold270020222960	rhodiola_crenulata	Rcrescaffold270020222960
Rdelscaffold2824380104370	rhododendron_delavayi	Rdelscaffold2824380104370
Rdelscaffold40870247360	rhododendron_delavayi	Rdelscaffold40870247360
Rdelscaffold4540259260	rhododendron_delavayi	Rdelscaffold4540259260
Rdelscaffold9630325450	rhododendron_delavayi	Rdelscaffold9630325450
KAG5521796.1_rhododendron_griersonianum	rhododendron_griersonianum	KAG5521796.1_rhododendron_griersonianum