TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
quercus_lobata_QL05p087142	quercus_lobata	quercus_lobata_QL05p087142
Qrob02G0012470	quercus_robur	Qrob02G0012470
Qrob12G0011600	quercus_robur	Qrob12G0011600
quercus_rubra_Qurub.02G130600.1	quercus_rubra	quercus_rubra_Qurub.02G130600.1
quercus_rubra_Qurub.11G168100.1	quercus_rubra	quercus_rubra_Qurub.11G168100.1
XP_023874598.1	quercus_suber	XP_023874598.1
XP_023887202.1	quercus_suber	XP_023887202.1
XP_023901911.1	quercus_suber	XP_023901911.1
XP_023902951.1	quercus_suber	XP_023902951.1
XP_023908832.1	quercus_suber	XP_023908832.1
XP_023909432.1	quercus_suber	XP_023909432.1
XP_023909630.1	quercus_suber	XP_023909630.1
XP_023927000.1	quercus_suber	XP_023927000.1
quercus_variabilis_Quercus_variabilis00016870.1	quercus_variabilis	quercus_variabilis_Quercus_variabilis00016870.1
quercus_variabilis_Quercus_variabilis00056963.1	quercus_variabilis	quercus_variabilis_Quercus_variabilis00056963.1
Rnitcontig_2620068280	racomitrium_nitidulum	Rnitcontig_2620068280
Rnitcontig_5390182150	racomitrium_nitidulum	Rnitcontig_5390182150
Rnitcontig_5730189620	racomitrium_nitidulum	Rnitcontig_5730189620
Rnitcontig_8130265820	racomitrium_nitidulum	Rnitcontig_8130265820
Rnitcontig_8550295230	racomitrium_nitidulum	Rnitcontig_8550295230
Rnitcontig_920303790	racomitrium_nitidulum	Rnitcontig_920303790
RdisGWHAAKD000233350059260.1	raddia_distichophylla	RdisGWHAAKD000233350059260.1
RdisGWHAAKD000276800080900.1	raddia_distichophylla	RdisGWHAAKD000276800080900.1
RdisGWHAAKD000356970141230.1	raddia_distichophylla	RdisGWHAAKD000356970141230.1
RdisGWHAAKD000382180173790.1	raddia_distichophylla	RdisGWHAAKD000382180173790.1
RdisGWHAAKD000382180173800.1	raddia_distichophylla	RdisGWHAAKD000382180173800.1
Rgu000914	raddia_guianensis	Rgu000914
Rgu001968	raddia_guianensis	Rgu001968
Rgu004792	raddia_guianensis	Rgu004792
Rgu004793	raddia_guianensis	Rgu004793