Aethionema arabicum (aethionema_arabicum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 33.17% Phenylpropanoid pathway 20.65% Alkaloid pathway 20.14% Flavonoid pathway 11.22% Rosmarinic acid pathway 7.77% Steroid pathway 7.05%

Family Distribution

1390 Candidate Genes

BAHD 8.59% C4H 5.97% C3'H/CYP98A 5.73% POD 3.93% CYP76 3.93% 4CL 3.67% UGT 3.2% IFS 3.17%

Other Families 61.82%

More Families (94)

7DLGT 105 3.06% UFGT 105 3.06% NMT 96 2.79% T3O 94 2.74% DWF4/CYP90B1 85 2.47% SMT1/SMT2/SMT3 78 2.27% SGD 72 2.1% F3'H/CYP75B 72 2.1% BR6OX2/CYP85A2 69 2.01% F3H 64 1.86% STR 57 1.66% COMT 49 1.43% TPS 46 1.34% CODM/T6ODM 45 1.31% SLS 43 1.25% CYP71 42 1.22% HCT 40 1.16% CAD 38 1.11% CSE 38 1.11% TAT 36 1.05% TRI/TRII 35 1.02% PYKS 34 0.99% GES 33 0.96% CAS 33 0.96% IFR 32 0.93% T16H 30 0.87% F3'5'H/CYP75A 30 0.87% CYP90D1 29 0.84% H6H 28 0.81% 16OMT 26 0.76% IO 25 0.73% F5H/CYP84A 25 0.73% RAS 25 0.73% FNS 22 0.64% GS 21 0.61% LAC 21 0.61% G8O/G8H 18 0.52% BBE 17 0.49% PMT 17 0.49% 8HGO 17 0.49% ANR 17 0.49% BR6OX1/CYP85A1 17 0.49% CCR 16 0.47% LAMT 15 0.44% CPD/CYP90A1 14 0.41% FPPS 14 0.41% SMO1/SMO2 13 0.38% GGPPS 13 0.38% COR 12 0.35% CYP80B1 10 0.29% CYP719 9 0.26% ANS/LDOX 9 0.26% 7DLH 8 0.23% CPR 8 0.23% SQE 8 0.23% CNMT 7 0.2% MPO 7 0.2% DFR 7 0.2% SQS/FDFT1 7 0.2% CYP51G1 7 0.2% AACT 7 0.2% NCS 6 0.17% PAL 6 0.17% CCoAOMT 6 0.17% ROT3/CYP90C1 6 0.17% MVD 6 0.17% CHS 5 0.15% HPPR 5 0.15% DET2 5 0.15% MVK 5 0.15% TYDC_DDC 4 0.12% XMT_MXMT_DXMT 4 0.12% DWF5 4 0.12% DWF7 4 0.12% CMK/IspE 4 0.12% DXR 3 0.09% IDI 3 0.09% DXS 3 0.09% ISY 2 0.06% CYP80F1 2 0.06% TDC 2 0.06% ADC 2 0.06% CHI 2 0.06% HYD1 2 0.06% HDR/IspH 2 0.06% HDS/IspG 2 0.06% HMGR 2 0.06% PMK 2 0.06% MDS/IspF 2 0.06% MCT/IspD 2 0.06% DWF1 1 0.03% FK 1 0.03% CPI1 1 0.03% HMGS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	461	19	BAHD (231)	View species results
Phenylpropanoid pathway	287	11	POD (118)	View species results
Alkaloid pathway	280	19	SGD (59)	View species results
Flavonoid pathway	156	8	UFGT (101)	View species results
Rosmarinic acid pathway	108	7	C4H (33)	View species results
Steroid pathway	98	10	SMT1/SMT2/SMT3 (46)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1281	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	360	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
AaraAA_C1070790000340	Alkaloid	NMT	medium	pass	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_C1295890009690	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_C1575250030630	Alkaloid	NMT	medium	pass	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
AaraAA_C1813790046200	Alkaloid	NMT	low	borderline	NMT__00016__sp_F4JNX3_CMKMT_ARATH
AaraAA_C1916030052660	Alkaloid	NMT	medium	pass	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
AaraAA_C1925190053330	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
AaraAA_C1925190053340	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
AaraAA_scaffold11020062300	Alkaloid	NMT	low	borderline	NMT__00014__sp_C3SBW0_PNMT_THLFG
AaraAA_scaffold11730066090	Alkaloid	NMT	medium	pass	NMT__00022__sp_O65312_MEDEA_ARATH
AaraAA_scaffold12000067620	Alkaloid	NMT	medium	borderline	NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
AaraAA_scaffold12100069050	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
AaraAA_scaffold14530080180	Alkaloid	NMT	low	borderline	NMT__00066__sp_Q9SU94_ANM11_ARATH
AaraAA_scaffold14560081140	Alkaloid	NMT	low	borderline	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
AaraAA_scaffold1500082900	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
AaraAA_scaffold17140092230	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
AaraAA_scaffold17480094590	Alkaloid	NMT	medium	borderline	NMT__00057__sp_Q9FR44_PEAM1_ARATH
AaraAA_scaffold17600097420	Alkaloid	NMT	medium	pass	NMT__00054__sp_Q9FF80_SUVH1_ARATH
AaraAA_scaffold18170099720	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
AaraAA_scaffold18430100410	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
AaraAA_scaffold18430101030	Alkaloid	NMT	low	borderline	NMT__00040__sp_Q84WW6_ASHH1_ARATH
AaraAA_scaffold18430101510	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
AaraAA_scaffold18430101710	Alkaloid	NMT	medium	borderline	NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
AaraAA_scaffold18430101730	Alkaloid	NMT	medium	pass	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_scaffold18430101740	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_scaffold18430101770	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_scaffold18430101790	Alkaloid	NMT	medium	pass	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_scaffold18430101810	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_scaffold18430101820	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
AaraAA_scaffold18680103470	Alkaloid	NMT	medium	borderline	NMT__00023__sp_O82210_ANM12_ARATH
AaraAA_scaffold20400112590	Alkaloid	NMT	medium	pass	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_scaffold21780116150	Alkaloid	NMT	medium	pass	NMT__00024__sp_P0CB22_ATX2_ARATH
AaraAA_scaffold21780116160	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
AaraAA_scaffold22160118200	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
AaraAA_scaffold22380119340	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
AaraAA_scaffold22980124970	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
AaraAA_scaffold23030125220	Alkaloid	NMT	medium	pass	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
AaraAA_scaffold23550127280	Alkaloid	NMT	low	borderline	NMT__00006__sp_A0A6C0WW38_CKCS_CAMSB
AaraAA_scaffold24180131680	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
AaraAA_scaffold25350138690	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
AaraAA_scaffold27180148810	Alkaloid	NMT	medium	pass	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
AaraAA_scaffold29570157440	Alkaloid	NMT	low	borderline	NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
AaraAA_scaffold33980172770	Alkaloid	NMT	medium	borderline	NMT__00058__sp_Q9FZN8_TCS1_CAMSI
AaraAA_scaffold33980173250	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
AaraAA_scaffold34870178950	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
AaraAA_scaffold34870180400	Alkaloid	NMT	low	borderline	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
AaraAA_scaffold35500184230	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
AaraAA_scaffold35500184240	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
AaraAA_scaffold37040192410	Alkaloid	NMT	medium	pass	NMT__00021__sp_O64827_SUVR5_ARATH
AaraAA_scaffold38150197490	Alkaloid	NMT	medium	pass	NMT__00054__sp_Q9FF80_SUVH1_ARATH
AaraAA_scaffold39960204690	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR