Aethionema arabicum (aethionema_arabicum)
Imported from atlas release summary for Aethionema arabicum.
1390
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1390
Candidate Genes
BAHD
8.59%
C4H
5.97%
C3'H/CYP98A
5.73%
POD
3.93%
CYP76
3.93%
4CL
3.67%
UGT
3.2%
IFS
3.17%
Other Families
61.82%
More Families (94)
7DLGT
105
3.06%
UFGT
105
3.06%
NMT
96
2.79%
T3O
94
2.74%
DWF4/CYP90B1
85
2.47%
SMT1/SMT2/SMT3
78
2.27%
SGD
72
2.1%
F3'H/CYP75B
72
2.1%
BR6OX2/CYP85A2
69
2.01%
F3H
64
1.86%
STR
57
1.66%
COMT
49
1.43%
TPS
46
1.34%
CODM/T6ODM
45
1.31%
SLS
43
1.25%
CYP71
42
1.22%
HCT
40
1.16%
CAD
38
1.11%
CSE
38
1.11%
TAT
36
1.05%
TRI/TRII
35
1.02%
PYKS
34
0.99%
GES
33
0.96%
CAS
33
0.96%
IFR
32
0.93%
T16H
30
0.87%
F3'5'H/CYP75A
30
0.87%
CYP90D1
29
0.84%
H6H
28
0.81%
16OMT
26
0.76%
IO
25
0.73%
F5H/CYP84A
25
0.73%
RAS
25
0.73%
FNS
22
0.64%
GS
21
0.61%
LAC
21
0.61%
G8O/G8H
18
0.52%
BBE
17
0.49%
PMT
17
0.49%
8HGO
17
0.49%
ANR
17
0.49%
BR6OX1/CYP85A1
17
0.49%
CCR
16
0.47%
LAMT
15
0.44%
CPD/CYP90A1
14
0.41%
FPPS
14
0.41%
SMO1/SMO2
13
0.38%
GGPPS
13
0.38%
COR
12
0.35%
CYP80B1
10
0.29%
CYP719
9
0.26%
ANS/LDOX
9
0.26%
7DLH
8
0.23%
CPR
8
0.23%
SQE
8
0.23%
CNMT
7
0.2%
MPO
7
0.2%
DFR
7
0.2%
SQS/FDFT1
7
0.2%
CYP51G1
7
0.2%
AACT
7
0.2%
NCS
6
0.17%
PAL
6
0.17%
CCoAOMT
6
0.17%
ROT3/CYP90C1
6
0.17%
MVD
6
0.17%
CHS
5
0.15%
HPPR
5
0.15%
DET2
5
0.15%
MVK
5
0.15%
TYDC_DDC
4
0.12%
XMT_MXMT_DXMT
4
0.12%
DWF5
4
0.12%
DWF7
4
0.12%
CMK/IspE
4
0.12%
DXR
3
0.09%
IDI
3
0.09%
DXS
3
0.09%
ISY
2
0.06%
CYP80F1
2
0.06%
TDC
2
0.06%
ADC
2
0.06%
CHI
2
0.06%
HYD1
2
0.06%
HDR/IspH
2
0.06%
HDS/IspG
2
0.06%
HMGR
2
0.06%
PMK
2
0.06%
MDS/IspF
2
0.06%
MCT/IspD
2
0.06%
DWF1
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
HMGS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 461 | 19 | BAHD (231) | View species results |
| Phenylpropanoid pathway | 287 | 11 | POD (118) | View species results |
| Alkaloid pathway | 280 | 19 | SGD (59) | View species results |
| Flavonoid pathway | 156 | 8 | UFGT (101) | View species results |
| Rosmarinic acid pathway | 108 | 7 | C4H (33) | View species results |
| Steroid pathway | 98 | 10 | SMT1/SMT2/SMT3 (46) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1281 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 360 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| AaraAA_C1714730039840 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_C1835590047670 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_C1837710047810 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_C1874390050330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold10680057470 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold10680058220 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold10780060360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold11610065000 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold14280077220 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold14280077230 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold17480095980 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold17480095990 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold17540096800 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold22500120040 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold24010130430 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold25130137010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold25810141660 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold25810141670 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold25810141820 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold33370169590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold34870178770 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold34870179980 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold34870179990 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold35930185560 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold35930186980 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold37120192820 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold38150197430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold40000205390 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold40320207070 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold40340207210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold42580215850 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold42580215860 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold42580215870 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold42580215880 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold42580215890 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold42580215900 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold42920217860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold42920218060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold43560221290 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| AaraAA_scaffold44070225120 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold44120225790 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold47130238050 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold50320252630 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold51400260120 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold51400260200 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold51710261790 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold51710261880 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold52050263470 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold52050263820 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AaraAA_scaffold54010274330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |