PlantSME Plant secondary metabolism enzyme database

Aethionema arabicum (aethionema_arabicum)

Imported from atlas release summary for Aethionema arabicum.

1390
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (231) View species results
Phenylpropanoid pathway 287 11 POD (118) View species results
Alkaloid pathway 280 19 SGD (59) View species results
Flavonoid pathway 156 8 UFGT (101) View species results
Rosmarinic acid pathway 108 7 C4H (33) View species results
Steroid pathway 98 10 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1281 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 360 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
AaraAA_C1599710032260 Alkaloid PMT medium pass
AaraAA_C1861950049350 Alkaloid PMT medium pass
AaraAA_C1868470049960 Alkaloid PMT medium pass
AaraAA_scaffold14410079330 Alkaloid PMT medium borderline
AaraAA_scaffold14410079340 Alkaloid PMT medium borderline
AaraAA_scaffold44020224240 Alkaloid PMT low borderline
AaraAA_scaffold45130230000 Alkaloid PMT low borderline
AaraAA_scaffold47170238870 Alkaloid PMT low borderline
AaraAA_scaffold47170238880 Alkaloid PMT low borderline
AaraAA_scaffold47170238890 Alkaloid PMT low borderline
AaraAA_scaffold490244600 Alkaloid PMT low borderline
AaraAA_scaffold55900284840 Alkaloid PMT medium pass
AaraAA_scaffold56660293450 Alkaloid PMT low borderline
AaraAA_scaffold57210297970 Alkaloid PMT medium pass
AaraAA_scaffold60660319870 Alkaloid PMT low borderline
AaraAA_scaffold64170336470 Alkaloid PMT medium borderline
AaraAA_scaffold9320374660 Alkaloid PMT low borderline