Aethionema arabicum (aethionema_arabicum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 33.17% Phenylpropanoid pathway 20.65% Alkaloid pathway 20.14% Flavonoid pathway 11.22% Rosmarinic acid pathway 7.77% Steroid pathway 7.05%

Family Distribution

1390 Candidate Genes

BAHD 8.59% C4H 5.97% C3'H/CYP98A 5.73% POD 3.93% CYP76 3.93% 4CL 3.67% UGT 3.2% IFS 3.17%

Other Families 61.82%

More Families (94)

7DLGT 105 3.06% UFGT 105 3.06% NMT 96 2.79% T3O 94 2.74% DWF4/CYP90B1 85 2.47% SMT1/SMT2/SMT3 78 2.27% SGD 72 2.1% F3'H/CYP75B 72 2.1% BR6OX2/CYP85A2 69 2.01% F3H 64 1.86% STR 57 1.66% COMT 49 1.43% TPS 46 1.34% CODM/T6ODM 45 1.31% SLS 43 1.25% CYP71 42 1.22% HCT 40 1.16% CAD 38 1.11% CSE 38 1.11% TAT 36 1.05% TRI/TRII 35 1.02% PYKS 34 0.99% GES 33 0.96% CAS 33 0.96% IFR 32 0.93% T16H 30 0.87% F3'5'H/CYP75A 30 0.87% CYP90D1 29 0.84% H6H 28 0.81% 16OMT 26 0.76% IO 25 0.73% F5H/CYP84A 25 0.73% RAS 25 0.73% FNS 22 0.64% GS 21 0.61% LAC 21 0.61% G8O/G8H 18 0.52% BBE 17 0.49% PMT 17 0.49% 8HGO 17 0.49% ANR 17 0.49% BR6OX1/CYP85A1 17 0.49% CCR 16 0.47% LAMT 15 0.44% CPD/CYP90A1 14 0.41% FPPS 14 0.41% SMO1/SMO2 13 0.38% GGPPS 13 0.38% COR 12 0.35% CYP80B1 10 0.29% CYP719 9 0.26% ANS/LDOX 9 0.26% 7DLH 8 0.23% CPR 8 0.23% SQE 8 0.23% CNMT 7 0.2% MPO 7 0.2% DFR 7 0.2% SQS/FDFT1 7 0.2% CYP51G1 7 0.2% AACT 7 0.2% NCS 6 0.17% PAL 6 0.17% CCoAOMT 6 0.17% ROT3/CYP90C1 6 0.17% MVD 6 0.17% CHS 5 0.15% HPPR 5 0.15% DET2 5 0.15% MVK 5 0.15% TYDC_DDC 4 0.12% XMT_MXMT_DXMT 4 0.12% DWF5 4 0.12% DWF7 4 0.12% CMK/IspE 4 0.12% DXR 3 0.09% IDI 3 0.09% DXS 3 0.09% ISY 2 0.06% CYP80F1 2 0.06% TDC 2 0.06% ADC 2 0.06% CHI 2 0.06% HYD1 2 0.06% HDR/IspH 2 0.06% HDS/IspG 2 0.06% HMGR 2 0.06% PMK 2 0.06% MDS/IspF 2 0.06% MCT/IspD 2 0.06% DWF1 1 0.03% FK 1 0.03% CPI1 1 0.03% HMGS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	461	19	BAHD (231)	View species results
Phenylpropanoid pathway	287	11	POD (118)	View species results
Alkaloid pathway	280	19	SGD (59)	View species results
Flavonoid pathway	156	8	UFGT (101)	View species results
Rosmarinic acid pathway	108	7	C4H (33)	View species results
Steroid pathway	98	10	SMT1/SMT2/SMT3 (46)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1281	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	360	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
AaraAA_scaffold39960204750	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
AaraAA_scaffold41300211420	Alkaloid	NMT	low	borderline	NMT__00030__sp_Q43088_RBCMT_PEA
AaraAA_scaffold42960219300	Alkaloid	NMT	medium	pass	NMT__00068__sp_Q9XI84_RBCMT_ARATH
AaraAA_scaffold42960219310	Alkaloid	NMT	medium	pass	NMT__00068__sp_Q9XI84_RBCMT_ARATH
AaraAA_scaffold43980223330	Alkaloid	NMT	medium	borderline	NMT__00006__sp_A0A6C0WW38_CKCS_CAMSB
AaraAA_scaffold44070225210	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
AaraAA_scaffold45230231200	Alkaloid	NMT	medium	pass	NMT__00069__sp_Q9ZSM8_EZA1_ARATH
AaraAA_scaffold45230231230	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
AaraAA_scaffold45510232260	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
AaraAA_scaffold47130238700	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
AaraAA_scaffold47510239470	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
AaraAA_scaffold49230246290	Alkaloid	NMT	low	borderline	NMT__00054__sp_Q9FF80_SUVH1_ARATH
AaraAA_scaffold49230246380	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
AaraAA_scaffold50630255560	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
AaraAA_scaffold50630255610	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
AaraAA_scaffold52400265430	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
AaraAA_scaffold52790267490	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
AaraAA_scaffold53620272090	Alkaloid	NMT	low	borderline	NMT__00054__sp_Q9FF80_SUVH1_ARATH
AaraAA_scaffold53700272270	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
AaraAA_scaffold54240275210	Alkaloid	NMT	low	borderline	NMT__00040__sp_Q84WW6_ASHH1_ARATH
AaraAA_scaffold55900285250	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
AaraAA_scaffold56420289070	Alkaloid	NMT	medium	pass	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
AaraAA_scaffold56700293690	Alkaloid	NMT	medium	pass	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
AaraAA_scaffold56700293820	Alkaloid	NMT	medium	borderline	NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
AaraAA_scaffold57080297370	Alkaloid	NMT	medium	pass	NMT__00054__sp_Q9FF80_SUVH1_ARATH
AaraAA_scaffold57880302870	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
AaraAA_scaffold5800303290	Alkaloid	NMT	medium	pass	NMT__00024__sp_P0CB22_ATX2_ARATH
AaraAA_scaffold61250323930	Alkaloid	NMT	medium	pass	NMT__00020__sp_O23372_ATXR3_ARATH
AaraAA_scaffold62310328200	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
AaraAA_scaffold62460328490	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
AaraAA_scaffold62470329410	Alkaloid	NMT	medium	pass	NMT__00017__sp_F4K1J4_ATXR7_ARATH
AaraAA_scaffold63050331830	Alkaloid	NMT	medium	borderline	NMT__00070__sp_W5U2K2_NMT_CATRO
AaraAA_scaffold64280337310	Alkaloid	NMT	medium	pass	NMT__00024__sp_P0CB22_ATX2_ARATH
AaraAA_scaffold6520344010	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH
AaraAA_scaffold65630345430	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
AaraAA_scaffold67000350350	Alkaloid	NMT	low	borderline	NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
AaraAA_scaffold68720357760	Alkaloid	NMT	low	borderline	NMT__00054__sp_Q9FF80_SUVH1_ARATH
AaraAA_scaffold7130358630	Alkaloid	NMT	medium	borderline	NMT__00023__sp_O82210_ANM12_ARATH
AaraAA_scaffold7130358940	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
AaraAA_scaffold7600361170	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
AaraAA_scaffold7620361440	Alkaloid	NMT	medium	pass	NMT__00067__sp_Q9T0G7_SUVH9_ARATH
AaraAA_scaffold8340364520	Alkaloid	NMT	medium	borderline	NMT__00038__sp_Q84PP7_MXMT2_COFAR
AaraAA_scaffold8740368610	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
AaraAA_scaffold9050370640	Alkaloid	NMT	medium	pass	NMT__00055__sp_Q9FNC7_SUVR2_ARATH
AaraAA_scaffold9050371430	Alkaloid	NMT	medium	pass	NMT__00019__sp_O22781_SUVH2_ARATH
AaraAA_scaffold9660377360	Alkaloid	NMT	low	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI