Aethionema arabicum (aethionema_arabicum)
Imported from atlas release summary for Aethionema arabicum.
1390
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1390
Candidate Genes
BAHD
8.59%
C4H
5.97%
C3'H/CYP98A
5.73%
POD
3.93%
CYP76
3.93%
4CL
3.67%
UGT
3.2%
IFS
3.17%
Other Families
61.82%
More Families (94)
7DLGT
105
3.06%
UFGT
105
3.06%
NMT
96
2.79%
T3O
94
2.74%
DWF4/CYP90B1
85
2.47%
SMT1/SMT2/SMT3
78
2.27%
SGD
72
2.1%
F3'H/CYP75B
72
2.1%
BR6OX2/CYP85A2
69
2.01%
F3H
64
1.86%
STR
57
1.66%
COMT
49
1.43%
TPS
46
1.34%
CODM/T6ODM
45
1.31%
SLS
43
1.25%
CYP71
42
1.22%
HCT
40
1.16%
CAD
38
1.11%
CSE
38
1.11%
TAT
36
1.05%
TRI/TRII
35
1.02%
PYKS
34
0.99%
GES
33
0.96%
CAS
33
0.96%
IFR
32
0.93%
T16H
30
0.87%
F3'5'H/CYP75A
30
0.87%
CYP90D1
29
0.84%
H6H
28
0.81%
16OMT
26
0.76%
IO
25
0.73%
F5H/CYP84A
25
0.73%
RAS
25
0.73%
FNS
22
0.64%
GS
21
0.61%
LAC
21
0.61%
G8O/G8H
18
0.52%
BBE
17
0.49%
PMT
17
0.49%
8HGO
17
0.49%
ANR
17
0.49%
BR6OX1/CYP85A1
17
0.49%
CCR
16
0.47%
LAMT
15
0.44%
CPD/CYP90A1
14
0.41%
FPPS
14
0.41%
SMO1/SMO2
13
0.38%
GGPPS
13
0.38%
COR
12
0.35%
CYP80B1
10
0.29%
CYP719
9
0.26%
ANS/LDOX
9
0.26%
7DLH
8
0.23%
CPR
8
0.23%
SQE
8
0.23%
CNMT
7
0.2%
MPO
7
0.2%
DFR
7
0.2%
SQS/FDFT1
7
0.2%
CYP51G1
7
0.2%
AACT
7
0.2%
NCS
6
0.17%
PAL
6
0.17%
CCoAOMT
6
0.17%
ROT3/CYP90C1
6
0.17%
MVD
6
0.17%
CHS
5
0.15%
HPPR
5
0.15%
DET2
5
0.15%
MVK
5
0.15%
TYDC_DDC
4
0.12%
XMT_MXMT_DXMT
4
0.12%
DWF5
4
0.12%
DWF7
4
0.12%
CMK/IspE
4
0.12%
DXR
3
0.09%
IDI
3
0.09%
DXS
3
0.09%
ISY
2
0.06%
CYP80F1
2
0.06%
TDC
2
0.06%
ADC
2
0.06%
CHI
2
0.06%
HYD1
2
0.06%
HDR/IspH
2
0.06%
HDS/IspG
2
0.06%
HMGR
2
0.06%
PMK
2
0.06%
MDS/IspF
2
0.06%
MCT/IspD
2
0.06%
DWF1
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
HMGS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 461 | 19 | BAHD (231) | View species results |
| Phenylpropanoid pathway | 287 | 11 | POD (118) | View species results |
| Alkaloid pathway | 280 | 19 | SGD (59) | View species results |
| Flavonoid pathway | 156 | 8 | UFGT (101) | View species results |
| Rosmarinic acid pathway | 108 | 7 | C4H (33) | View species results |
| Steroid pathway | 98 | 10 | SMT1/SMT2/SMT3 (46) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1281 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 360 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| AaraAA_scaffold56420288810 | Phenylpropanoid | POD | low | borderline | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| AaraAA_scaffold56740295150 | Phenylpropanoid | POD | low | borderline | POD__00018__sp_Q8H0V5_OCP3_ARATH |
| AaraAA_scaffold56740295170 | Phenylpropanoid | POD | low | borderline | POD__00018__sp_Q8H0V5_OCP3_ARATH |
| AaraAA_scaffold57020296820 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| AaraAA_scaffold58240306090 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| AaraAA_scaffold59210313030 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| AaraAA_scaffold60860320630 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| AaraAA_scaffold60860320640 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| AaraAA_scaffold60860320650 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| AaraAA_scaffold60860320660 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| AaraAA_scaffold6090321580 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| AaraAA_scaffold61150323240 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| AaraAA_scaffold61150323300 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| AaraAA_scaffold61510325130 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| AaraAA_scaffold62470329600 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| AaraAA_scaffold63940335010 | Phenylpropanoid | POD | low | borderline | POD__00015__sp_Q69SV0_APX8_ORYSJ |
| AaraAA_scaffold64280337280 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| AaraAA_scaffold64530339290 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| AaraAA_scaffold64940342640 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| AaraAA_scaffold64940342670 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| AaraAA_scaffold64940342680 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| AaraAA_scaffold66740349350 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| AaraAA_scaffold68460356060 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| AaraAA_scaffold68580356480 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| AaraAA_scaffold68710357470 | Phenylpropanoid | POD | low | borderline | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| AaraAA_scaffold7060358470 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| AaraAA_scaffold7130359170 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| AaraAA_scaffold7210359680 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| AaraAA_scaffold7330360010 | Phenylpropanoid | POD | medium | pass | POD__00022__sp_Q9LU86_PRXQ_ARATH |
| AaraAA_scaffold8340365060 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| AaraAA_scaffold8710367610 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| AaraAA_scaffold9050370820 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| AaraAA_scaffold9050371700 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| AaraAA_scaffold9050371860 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| AaraAA_scaffold9610377050 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |