PlantSME Plant secondary metabolism enzyme database

Aethionema arabicum (aethionema_arabicum)

Imported from atlas release summary for Aethionema arabicum.

1390
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (231) View species results
Phenylpropanoid pathway 287 11 POD (118) View species results
Alkaloid pathway 280 19 SGD (59) View species results
Flavonoid pathway 156 8 UFGT (101) View species results
Rosmarinic acid pathway 108 7 C4H (33) View species results
Steroid pathway 98 10 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1281 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 360 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
AaraAA_scaffold36590190460 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold41640213190 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold41640213210 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold41640213220 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold41750214020 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold42920218090 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold44020223920 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold44070224890 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold47130238370 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold49510248200 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold49510248220 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold49510248960 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold50570253910 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold50570254940 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold56090287200 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold56700293830 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold56740294220 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold58040304360 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold58040304370 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold58600309420 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold58920310420 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold60530317520 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold61090322580 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold61190323400 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold63200332570 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold64070335770 Alkaloid CODM/T6ODM medium borderline
AaraAA_scaffold8710367870 Alkaloid CODM/T6ODM medium borderline
AaraAA_C1676430037420 Alkaloid COR medium pass
AaraAA_scaffold2290121870 Alkaloid COR medium pass
AaraAA_scaffold34040174570 Alkaloid COR medium pass
AaraAA_scaffold34040174610 Alkaloid COR medium pass
AaraAA_scaffold34040174650 Alkaloid COR medium pass
AaraAA_scaffold34280175990 Alkaloid COR medium pass
AaraAA_scaffold37380193200 Alkaloid COR medium pass
AaraAA_scaffold44120226310 Alkaloid COR medium pass
AaraAA_scaffold44120226320 Alkaloid COR medium pass
AaraAA_scaffold44120226330 Alkaloid COR medium pass
AaraAA_scaffold52300264570 Alkaloid COR low borderline
AaraAA_scaffold53920273960 Alkaloid COR medium pass
AaraAA_C1134970001510 Alkaloid CYP719 low borderline
AaraAA_C1178310003290 Alkaloid CYP719 low borderline
AaraAA_scaffold19410106840 Alkaloid CYP719 medium borderline
AaraAA_scaffold33370169830 Alkaloid CYP719 medium borderline
AaraAA_scaffold35930186760 Alkaloid CYP719 low borderline
AaraAA_scaffold44290227210 Alkaloid CYP719 medium borderline
AaraAA_scaffold49180246070 Alkaloid CYP719 medium borderline
AaraAA_scaffold56490290350 Alkaloid CYP719 medium borderline
AaraAA_scaffold58950310470 Alkaloid CYP719 medium borderline
AaraAA_C1652750035890 Alkaloid CYP80B1 medium borderline
AaraAA_C1822670046760 Alkaloid CYP80B1 medium borderline