PlantSME Plant secondary metabolism enzyme database

Amaranthus cruentus (amaranthus_cruentus)

Imported from atlas release summary for Amaranthus cruentus.

2058
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 666 19 BAHD (339) View species results
Alkaloid pathway 492 23 NMT (179) View species results
Phenylpropanoid pathway 341 11 POD (152) View species results
Flavonoid pathway 218 12 UFGT (139) View species results
Steroid pathway 176 11 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 165 7 C4H (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 491 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
AcruScioBoG_102831_HRSCAF_1030440003500.1 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_102831_HRSCAF_1030440003500.2 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_102831_HRSCAF_1030440003500.3 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_102834_HRSCAF_1030550015100.1 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_102835_HRSCAF_1030590024080.1 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_102837_HRSCAF_1030740033970.1 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_102837_HRSCAF_1030740033970.2 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_102837_HRSCAF_1030740038300.1 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_102839_HRSCAF_1030930048430.1 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_102840_HRSCAF_1030990058130.1 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_12795_HRSCAF_128480076970.1 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_17730_HRSCAF_178110102570.3 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_17730_HRSCAF_178110102570.6 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_18778_HRSCAF_188630111100.2 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_19538_HRSCAF_196260129990.2 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_19538_HRSCAF_196260132720.1 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_19538_HRSCAF_196260134530.1 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_19743_HRSCAF_198340138090.1 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_22153_HRSCAF_222590150810.3 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_25048_HRSCAF_251670158300.1 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_25048_HRSCAF_251670158300.2 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_25048_HRSCAF_251670158300.5 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_25048_HRSCAF_251670158300.6 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_25048_HRSCAF_251670160020.1 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_4119_HRSCAF_41380207460.1 Steroid CPD/CYP90A1 medium borderline
AcruScioBoG_4119_HRSCAF_41380211280.1 Steroid CPD/CYP90A1 low borderline
AcruScioBoG_52287_HRSCAF_524340219040.1 Steroid CPD/CYP90A1 medium borderline