PlantSME Plant secondary metabolism enzyme database

Amaranthus cruentus (amaranthus_cruentus)

Imported from atlas release summary for Amaranthus cruentus.

2058
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 666 19 BAHD (339) View species results
Alkaloid pathway 492 23 NMT (179) View species results
Phenylpropanoid pathway 341 11 POD (152) View species results
Flavonoid pathway 218 12 UFGT (139) View species results
Steroid pathway 176 11 SMT1/SMT2/SMT3 (66) View species results
Rosmarinic acid pathway 165 7 C4H (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 491 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
AcruScioBoG_102831_HRSCAF_1030440003500.1 Alkaloid T16H medium borderline
AcruScioBoG_102831_HRSCAF_1030440003500.2 Alkaloid T16H medium borderline
AcruScioBoG_102831_HRSCAF_1030440003500.3 Alkaloid T16H medium borderline
AcruScioBoG_102831_HRSCAF_1030440003830.1 Alkaloid T16H medium borderline
AcruScioBoG_102835_HRSCAF_1030590024080.1 Alkaloid T16H medium borderline
AcruScioBoG_102836_HRSCAF_1030720031620.1 Alkaloid T16H medium borderline
AcruScioBoG_102841_HRSCAF_1031140069110.2 Alkaloid T16H low borderline
AcruScioBoG_13798_HRSCAF_138620086350.1 Alkaloid T16H medium borderline
AcruScioBoG_17730_HRSCAF_178110104880.1 Alkaloid T16H medium borderline
AcruScioBoG_18782_HRSCAF_188670121920.1 Alkaloid T16H medium borderline
AcruScioBoG_18782_HRSCAF_188670121920.2 Alkaloid T16H medium borderline
AcruScioBoG_19538_HRSCAF_196260134530.1 Alkaloid T16H medium borderline
AcruScioBoG_19743_HRSCAF_198340139140.1 Alkaloid T16H medium borderline
AcruScioBoG_19743_HRSCAF_198340139140.2 Alkaloid T16H medium borderline
AcruScioBoG_19743_HRSCAF_198340140990.1 Alkaloid T16H low borderline
AcruScioBoG_19834_HRSCAF_199250147590.1 Alkaloid T16H medium borderline
AcruScioBoG_19834_HRSCAF_199250147590.2 Alkaloid T16H medium borderline
AcruScioBoG_19834_HRSCAF_199250147590.3 Alkaloid T16H medium borderline
AcruScioBoG_19834_HRSCAF_199250147590.4 Alkaloid T16H medium borderline
AcruScioBoG_19834_HRSCAF_199250147590.5 Alkaloid T16H medium borderline
AcruScioBoG_25048_HRSCAF_251670160010.1 Alkaloid T16H medium borderline
AcruScioBoG_26180_HRSCAF_263060166290.1 Alkaloid T16H medium borderline
AcruScioBoG_26180_HRSCAF_263060170280.1 Alkaloid T16H medium borderline
AcruScioBoG_26180_HRSCAF_263060170280.3 Alkaloid T16H medium borderline
AcruScioBoG_26769_HRSCAF_268990175360.1 Alkaloid T16H medium borderline
AcruScioBoG_3895_HRSCAF_39120195710.1 Alkaloid T16H medium pass
AcruScioBoG_4119_HRSCAF_41380207460.1 Alkaloid T16H medium borderline
AcruScioBoG_4119_HRSCAF_41380213770.2 Alkaloid T16H medium borderline