PlantSME Plant secondary metabolism enzyme database

Andreaea rupestris (andreaea_rupestris)

Imported from atlas release summary for Andreaea rupestris.

684
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (75) View species results
Alkaloid pathway 157 20 NMT (28) View species results
Terpenoid pathway 153 20 BAHD (66) View species results
Rosmarinic acid pathway 70 7 C4H (21) View species results
Flavonoid pathway 69 8 UFGT (19) View species results
Steroid pathway 47 13 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 599 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
Arupctg001285_np121212120134790 Phenylpropanoid 4CL low borderline
Arupctg001286_np121212120136360 Phenylpropanoid 4CL low borderline
Arupctg001345_np121212120147160 Phenylpropanoid 4CL low borderline
Arupctg001359_np121212120151810 Phenylpropanoid 4CL low borderline
Arupctg001359_np121212120151820 Phenylpropanoid 4CL low borderline
Arupctg001417_np121212120158580 Phenylpropanoid 4CL low borderline
Arupctg001417_np121212120159050 Phenylpropanoid 4CL medium pass
Arupctg001417_np121212120159060 Phenylpropanoid 4CL low borderline
Arupctg001519_np121212120176850 Phenylpropanoid 4CL medium pass
Arupctg001524_np121212120179100 Phenylpropanoid 4CL medium pass
Arupctg001584_np121212120184800 Phenylpropanoid 4CL medium pass
Arupctg001615_np121212120189140 Phenylpropanoid 4CL medium pass
Arupctg001657_np121212120198880 Phenylpropanoid 4CL low borderline
Arupctg001704_np121212120209210 Phenylpropanoid 4CL low borderline
Arupctg001782_np121212120215370 Phenylpropanoid 4CL medium pass
Arupctg001820_np121212120223970 Phenylpropanoid 4CL low borderline
Arupctg001829_np121212120228900 Phenylpropanoid 4CL medium pass
Arupctg001840_np121212120230240 Phenylpropanoid 4CL medium pass
Arupctg001861_np121212120232460 Phenylpropanoid 4CL low borderline
Arupctg001867_np121212120233680 Phenylpropanoid 4CL low borderline
Arupctg001876_np121212120236060 Phenylpropanoid 4CL low borderline
Arupctg002093_np121212120256780 Phenylpropanoid 4CL medium pass
Arupctg000133_np121212120000750 Rosmarinic Acid 4CL low borderline
Arupctg000506_np121212120007440 Rosmarinic Acid 4CL low borderline
Arupctg000598_np121212120013160 Rosmarinic Acid 4CL medium pass
Arupctg000614_np121212120017580 Rosmarinic Acid 4CL low borderline
Arupctg000633_np121212120021630 Rosmarinic Acid 4CL low borderline
Arupctg000685_np121212120034240 Rosmarinic Acid 4CL low borderline
Arupctg000881_np121212120074250 Rosmarinic Acid 4CL medium pass
Arupctg000882_np121212120074810 Rosmarinic Acid 4CL medium pass
Arupctg001110_np121212120113840 Rosmarinic Acid 4CL low borderline
Arupctg001112_np121212120114690 Rosmarinic Acid 4CL medium pass
Arupctg001142_np121212120116150 Rosmarinic Acid 4CL low borderline
Arupctg001274_np121212120131390 Rosmarinic Acid 4CL medium pass
Arupctg001284_np121212120134620 Rosmarinic Acid 4CL low borderline
Arupctg001285_np121212120134660 Rosmarinic Acid 4CL low borderline
Arupctg001285_np121212120134790 Rosmarinic Acid 4CL low borderline
Arupctg001286_np121212120136360 Rosmarinic Acid 4CL low borderline
Arupctg001345_np121212120147160 Rosmarinic Acid 4CL low borderline
Arupctg001359_np121212120151810 Rosmarinic Acid 4CL low borderline
Arupctg001359_np121212120151820 Rosmarinic Acid 4CL low borderline
Arupctg001417_np121212120158580 Rosmarinic Acid 4CL low borderline
Arupctg001417_np121212120159050 Rosmarinic Acid 4CL medium pass
Arupctg001417_np121212120159060 Rosmarinic Acid 4CL low borderline
Arupctg001519_np121212120176850 Rosmarinic Acid 4CL medium pass
Arupctg001524_np121212120179100 Rosmarinic Acid 4CL medium pass
Arupctg001584_np121212120184800 Rosmarinic Acid 4CL medium pass
Arupctg001615_np121212120189140 Rosmarinic Acid 4CL medium pass
Arupctg001657_np121212120198880 Rosmarinic Acid 4CL low borderline
Arupctg001704_np121212120209210 Rosmarinic Acid 4CL low borderline