PlantSME Plant secondary metabolism enzyme database

Andreaea rupestris (andreaea_rupestris)

Imported from atlas release summary for Andreaea rupestris.

684
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (75) View species results
Alkaloid pathway 157 20 NMT (28) View species results
Terpenoid pathway 153 20 BAHD (66) View species results
Rosmarinic acid pathway 70 7 C4H (21) View species results
Flavonoid pathway 69 8 UFGT (19) View species results
Steroid pathway 47 13 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 599 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Arupctg000019_np121212120000060 Alkaloid GS low borderline
Arupctg000278_np121212120001860 Alkaloid GS low borderline
Arupctg000563_np121212120007910 Alkaloid GS low borderline
Arupctg000563_np121212120007920 Alkaloid GS low borderline
Arupctg000564_np121212120009040 Alkaloid GS low borderline
Arupctg000565_np121212120009420 Alkaloid GS low borderline
Arupctg000565_np121212120009430 Alkaloid GS low borderline
Arupctg000685_np121212120035060 Alkaloid GS low borderline
Arupctg000694_np121212120037530 Alkaloid GS low borderline
Arupctg000696_np121212120038130 Alkaloid GS low borderline
Arupctg000699_np121212120040290 Alkaloid GS low borderline
Arupctg000704_np121212120041590 Alkaloid GS low borderline
Arupctg000707_np121212120042750 Alkaloid GS low borderline
Arupctg000744_np121212120046910 Alkaloid GS low borderline
Arupctg000745_np121212120046920 Alkaloid GS low borderline
Arupctg000771_np121212120052750 Alkaloid GS medium pass
Arupctg000771_np121212120053180 Alkaloid GS low borderline
Arupctg000854_np121212120069940 Alkaloid GS low borderline
Arupctg000907_np121212120086430 Alkaloid GS low borderline
Arupctg000991_np121212120098280 Alkaloid GS high pass
Arupctg001026_np121212120102320 Alkaloid GS medium pass
Arupctg001170_np121212120120070 Alkaloid GS low borderline
Arupctg001170_np121212120120100 Alkaloid GS low borderline
Arupctg001253_np121212120129010 Alkaloid GS low borderline
Arupctg001253_np121212120129030 Alkaloid GS high pass
Arupctg001268_np121212120130200 Alkaloid GS low borderline
Arupctg001584_np121212120184640 Alkaloid GS medium pass
Arupctg001625_np121212120191750 Alkaloid GS low borderline
Arupctg001632_np121212120192600 Alkaloid GS low borderline
Arupctg001632_np121212120192610 Alkaloid GS low borderline
Arupctg001637_np121212120194220 Alkaloid GS low borderline
Arupctg001664_np121212120202290 Alkaloid GS low borderline
Arupctg001792_np121212120216450 Alkaloid GS low borderline
Arupctg001876_np121212120236010 Alkaloid GS medium pass
Arupctg002051_np121212120250920 Alkaloid GS medium pass
Arupctg002059_np121212120251730 Alkaloid GS low borderline
Arupctg002093_np121212120256370 Alkaloid GS low borderline
Arupctg002218_np121212120266350 Alkaloid GS medium pass