Andreaea rupestris (andreaea_rupestris)
Imported from atlas release summary for Andreaea rupestris.
1008
Candidate Protein Records
684
Pathway-Level Records
1746
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1746
Family-Level Calls
4CL
6.19%
BAHD
5.56%
C4H
5.38%
C3'H/CYP98A
5.38%
NMT
4.98%
POD
4.7%
CYP76
4.01%
IFS
3.44%
Other Families
60.37%
More Families (96)
PAL
51
2.92%
STR
45
2.58%
DWF4/CYP90B1
43
2.46%
T3O
42
2.41%
IFR
41
2.35%
GS
38
2.18%
TRI/TRII
31
1.78%
F3H
31
1.78%
CAD
27
1.55%
CYP71
27
1.55%
COMT
26
1.49%
UFGT
25
1.43%
UGT
25
1.43%
PYKS
24
1.37%
BR6OX2/CYP85A2
23
1.32%
T16H
22
1.26%
7DLGT
21
1.2%
F3'H/CYP75B
21
1.2%
SMT1/SMT2/SMT3
21
1.2%
16OMT
18
1.03%
CODM/T6ODM
16
0.92%
CYP90D1
16
0.92%
CAS
16
0.92%
SGD
15
0.86%
H6H
15
0.86%
CSE
14
0.8%
RAS
14
0.8%
F3'5'H/CYP75A
13
0.74%
HCT
13
0.74%
CNMT
12
0.69%
COR
11
0.63%
G8O/G8H
11
0.63%
CPD/CYP90A1
11
0.63%
SLS
10
0.57%
LAMT
10
0.57%
LAC
10
0.57%
AACT
10
0.57%
IO
9
0.52%
DFR
9
0.52%
GGPPS
9
0.52%
CHS
8
0.46%
PMT
7
0.4%
8HGO
7
0.4%
ANR
7
0.4%
FNS
7
0.4%
CCR
7
0.4%
CPR
7
0.4%
DET2
7
0.4%
CYP719
6
0.34%
ISY
6
0.34%
CYP80B1
6
0.34%
DWF1
6
0.34%
ROT3/CYP90C1
6
0.34%
MVK
6
0.34%
7DLH
5
0.29%
ADC
5
0.29%
SQS/FDFT1
5
0.29%
HYD1
5
0.29%
TPS
5
0.29%
MVD
5
0.29%
CHI
4
0.23%
F5H/CYP84A
4
0.23%
SQE
4
0.23%
BR6OX1/CYP85A1
4
0.23%
HMGR
4
0.23%
MPO
3
0.17%
6OMT_4OMT_SOMT
3
0.17%
BBE
3
0.17%
NCS
3
0.17%
XMT_MXMT_DXMT
3
0.17%
CCoAOMT
3
0.17%
TAT
3
0.17%
HPPR
3
0.17%
SMO1/SMO2
3
0.17%
FPPS
3
0.17%
HDS/IspG
3
0.17%
GES
2
0.11%
ANS/LDOX
2
0.11%
DWF5
2
0.11%
DWF7
2
0.11%
CYP51G1
2
0.11%
DXR
2
0.11%
PMK
2
0.11%
HMGS
2
0.11%
IDI
2
0.11%
DXS
2
0.11%
GPPS
2
0.11%
CMK/IspE
2
0.11%
TDC
1
0.06%
TYDC_DDC
1
0.06%
ODC
1
0.06%
FK
1
0.06%
CPI1
1
0.06%
MCT/IspD
1
0.06%
HDR/IspH
1
0.06%
MDS/IspF
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 188 | 12 | POD (75) | View species results |
| Alkaloid pathway | 157 | 20 | NMT (28) | View species results |
| Terpenoid pathway | 153 | 20 | BAHD (66) | View species results |
| Rosmarinic acid pathway | 70 | 7 | C4H (21) | View species results |
| Flavonoid pathway | 69 | 8 | UFGT (19) | View species results |
| Steroid pathway | 47 | 13 | CAS (16) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 599 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 124 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Arupctg001459_np121212120167920 | Alkaloid | T3O | medium | borderline |
| Arupctg001459_np121212120167980 | Alkaloid | T3O | medium | borderline |
| Arupctg001518_np121212120176320 | Alkaloid | T3O | medium | pass |
| Arupctg001687_np121212120207950 | Alkaloid | T3O | medium | borderline |
| Arupctg001725_np121212120209450 | Alkaloid | T3O | medium | pass |
| Arupctg001740_np121212120211910 | Alkaloid | T3O | medium | pass |
| Arupctg001742_np121212120212390 | Alkaloid | T3O | medium | pass |
| Arupctg001799_np121212120219650 | Alkaloid | T3O | low | borderline |
| Arupctg001799_np121212120220830 | Alkaloid | T3O | low | borderline |
| Arupctg001824_np121212120225080 | Alkaloid | T3O | medium | pass |
| Arupctg001827_np121212120227490 | Alkaloid | T3O | medium | borderline |
| Arupctg001879_np121212120236730 | Alkaloid | T3O | medium | pass |
| Arupctg001902_np121212120237650 | Alkaloid | T3O | medium | pass |
| Arupctg000708_np121212120043550 | Alkaloid | TDC | low | borderline |
| Arupctg000215_np121212120000860 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg000408_np121212120004550 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg000670_np121212120030520 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg000677_np121212120032780 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg000708_np121212120043670 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg000770_np121212120052590 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg000810_np121212120058960 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg000818_np121212120062680 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001005_np121212120099690 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001205_np121212120123670 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001251_np121212120127670 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001307_np121212120143250 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001330_np121212120145510 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001362_np121212120152290 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001443_np121212120162970 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001450_np121212120164210 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001450_np121212120164220 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001489_np121212120172740 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001490_np121212120172800 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001490_np121212120173100 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001490_np121212120173110 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001645_np121212120197040 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001657_np121212120199470 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001657_np121212120199490 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg001820_np121212120223760 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001820_np121212120223880 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001861_np121212120232850 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001897_np121212120237100 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg002092_np121212120255330 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg002150_np121212120261000 | Alkaloid | TRI/TRII | low | borderline |
| Arupctg002210_np121212120265910 | Alkaloid | TRI/TRII | medium | pass |
| Arupctg001306_np121212120142030 | Alkaloid | TYDC_DDC | medium | borderline |
| Arupctg001421_np121212120160660 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Arupctg001566_np121212120183830 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Arupctg001566_np121212120183840 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Arupctg000133_np121212120000750 | Flavonoid | 4CL | low | borderline |