PlantSME Plant secondary metabolism enzyme database

Andreaea rupestris (andreaea_rupestris)

Imported from atlas release summary for Andreaea rupestris.

684
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (75) View species results
Alkaloid pathway 157 20 NMT (28) View species results
Terpenoid pathway 153 20 BAHD (66) View species results
Rosmarinic acid pathway 70 7 C4H (21) View species results
Flavonoid pathway 69 8 UFGT (19) View species results
Steroid pathway 47 13 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 599 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Arupctg001593_np121212120187090 Alkaloid 8HGO medium borderline
Arupctg001593_np121212120187130 Alkaloid 8HGO medium borderline
Arupctg001617_np121212120191110 Alkaloid 8HGO low borderline
Arupctg001827_np121212120226990 Alkaloid 8HGO medium borderline
Arupctg000670_np121212120031390 Alkaloid ADC medium pass
Arupctg001105_np121212120111780 Alkaloid ADC medium pass
Arupctg001105_np121212120111790 Alkaloid ADC medium pass
Arupctg001668_np121212120205030 Alkaloid ADC medium pass
Arupctg001902_np121212120237630 Alkaloid ADC medium pass
Arupctg000809_np121212120057830 Alkaloid BBE low borderline
Arupctg001107_np121212120112220 Alkaloid BBE low borderline
Arupctg001663_np121212120201610 Alkaloid BBE low borderline
Arupctg000708_np121212120043140 Alkaloid CNMT low borderline
Arupctg000809_np121212120057290 Alkaloid CNMT low borderline
Arupctg000829_np121212120064700 Alkaloid CNMT low borderline
Arupctg000845_np121212120068500 Alkaloid CNMT low borderline
Arupctg000846_np121212120068690 Alkaloid CNMT low borderline
Arupctg001171_np121212120120230 Alkaloid CNMT low borderline
Arupctg001796_np121212120216810 Alkaloid CNMT medium borderline
Arupctg001915_np121212120238960 Alkaloid CNMT low borderline
Arupctg001976_np121212120241490 Alkaloid CNMT medium borderline
Arupctg001976_np121212120242210 Alkaloid CNMT medium pass
Arupctg002141_np121212120260110 Alkaloid CNMT medium pass
Arupctg002204_np121212120265550 Alkaloid CNMT low borderline
Arupctg000626_np121212120019960 Alkaloid CODM/T6ODM medium borderline
Arupctg000670_np121212120031300 Alkaloid CODM/T6ODM medium borderline
Arupctg000694_np121212120037720 Alkaloid CODM/T6ODM medium borderline
Arupctg000696_np121212120038060 Alkaloid CODM/T6ODM medium borderline
Arupctg000697_np121212120038250 Alkaloid CODM/T6ODM medium borderline
Arupctg000765_np121212120051380 Alkaloid CODM/T6ODM medium borderline
Arupctg000946_np121212120091390 Alkaloid CODM/T6ODM medium borderline
Arupctg001197_np121212120122960 Alkaloid CODM/T6ODM medium borderline
Arupctg001197_np121212120123360 Alkaloid CODM/T6ODM medium borderline
Arupctg001443_np121212120162240 Alkaloid CODM/T6ODM medium borderline
Arupctg001759_np121212120213770 Alkaloid CODM/T6ODM medium borderline
Arupctg001768_np121212120214540 Alkaloid CODM/T6ODM medium borderline
Arupctg001799_np121212120218130 Alkaloid CODM/T6ODM medium borderline
Arupctg001799_np121212120219000 Alkaloid CODM/T6ODM medium borderline
Arupctg001799_np121212120219010 Alkaloid CODM/T6ODM medium borderline
Arupctg001799_np121212120219700 Alkaloid CODM/T6ODM medium borderline
Arupctg000278_np121212120002000 Alkaloid COR medium pass
Arupctg000707_np121212120042850 Alkaloid COR low borderline
Arupctg000871_np121212120072280 Alkaloid COR medium pass
Arupctg000871_np121212120072290 Alkaloid COR medium pass
Arupctg001061_np121212120106590 Alkaloid COR medium pass
Arupctg001221_np121212120125390 Alkaloid COR medium pass
Arupctg001221_np121212120125400 Alkaloid COR medium pass
Arupctg001593_np121212120187230 Alkaloid COR medium pass
Arupctg001617_np121212120190270 Alkaloid COR medium pass
Arupctg001898_np121212120237210 Alkaloid COR medium pass