PlantSME Plant secondary metabolism enzyme database

Andreaea rupestris (andreaea_rupestris)

Imported from atlas release summary for Andreaea rupestris.

684
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (75) View species results
Alkaloid pathway 157 20 NMT (28) View species results
Terpenoid pathway 153 20 BAHD (66) View species results
Rosmarinic acid pathway 70 7 C4H (21) View species results
Flavonoid pathway 69 8 UFGT (19) View species results
Steroid pathway 47 13 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 599 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Arupctg001253_np121212120129030 Alkaloid GS high pass
Arupctg001268_np121212120130200 Alkaloid GS low borderline
Arupctg001584_np121212120184640 Alkaloid GS medium pass
Arupctg001625_np121212120191750 Alkaloid GS low borderline
Arupctg001632_np121212120192600 Alkaloid GS low borderline
Arupctg001632_np121212120192610 Alkaloid GS low borderline
Arupctg001637_np121212120194220 Alkaloid GS low borderline
Arupctg001664_np121212120202290 Alkaloid GS low borderline
Arupctg001792_np121212120216450 Alkaloid GS low borderline
Arupctg001876_np121212120236010 Alkaloid GS medium pass
Arupctg002051_np121212120250920 Alkaloid GS medium pass
Arupctg002059_np121212120251730 Alkaloid GS low borderline
Arupctg002093_np121212120256370 Alkaloid GS low borderline
Arupctg002218_np121212120266350 Alkaloid GS medium pass
Arupctg000670_np121212120031310 Alkaloid H6H medium borderline
Arupctg000694_np121212120037730 Alkaloid H6H medium pass
Arupctg000708_np121212120043730 Alkaloid H6H medium borderline
Arupctg000809_np121212120058100 Alkaloid H6H medium pass
Arupctg000810_np121212120058930 Alkaloid H6H medium borderline
Arupctg001110_np121212120113330 Alkaloid H6H medium borderline
Arupctg001172_np121212120120410 Alkaloid H6H medium borderline
Arupctg001443_np121212120162050 Alkaloid H6H medium borderline
Arupctg001593_np121212120186570 Alkaloid H6H medium borderline
Arupctg001613_np121212120189000 Alkaloid H6H medium borderline
Arupctg001633_np121212120192930 Alkaloid H6H medium borderline
Arupctg001799_np121212120218070 Alkaloid H6H high pass
Arupctg001799_np121212120221140 Alkaloid H6H medium borderline
Arupctg001865_np121212120233590 Alkaloid H6H low borderline
Arupctg001990_np121212120244760 Alkaloid H6H medium borderline
Arupctg000612_np121212120017380 Alkaloid IO medium borderline
Arupctg000736_np121212120046070 Alkaloid IO medium pass
Arupctg000809_np121212120057850 Alkaloid IO medium borderline
Arupctg000832_np121212120065960 Alkaloid IO medium borderline
Arupctg001107_np121212120112200 Alkaloid IO medium borderline
Arupctg001173_np121212120120740 Alkaloid IO medium pass
Arupctg001306_np121212120142150 Alkaloid IO low borderline
Arupctg001454_np121212120166000 Alkaloid IO medium borderline
Arupctg001459_np121212120167930 Alkaloid IO medium borderline
Arupctg000685_np121212120034340 Alkaloid ISY medium pass
Arupctg000844_np121212120067770 Alkaloid ISY low borderline
Arupctg001355_np121212120150610 Alkaloid ISY medium pass
Arupctg001355_np121212120150620 Alkaloid ISY medium pass
Arupctg001355_np121212120150630 Alkaloid ISY medium pass
Arupctg001792_np121212120216190 Alkaloid ISY low borderline
Arupctg000607_np121212120015990 Alkaloid LAMT medium pass
Arupctg000784_np121212120054660 Alkaloid LAMT medium pass
Arupctg001101_np121212120111160 Alkaloid LAMT medium borderline
Arupctg001421_np121212120160510 Alkaloid LAMT medium pass
Arupctg001421_np121212120160520 Alkaloid LAMT medium pass
Arupctg001421_np121212120160540 Alkaloid LAMT low borderline