PlantSME Plant secondary metabolism enzyme database

Andreaea rupestris (andreaea_rupestris)

Imported from atlas release summary for Andreaea rupestris.

684
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (75) View species results
Alkaloid pathway 157 20 NMT (28) View species results
Terpenoid pathway 153 20 BAHD (66) View species results
Rosmarinic acid pathway 70 7 C4H (21) View species results
Flavonoid pathway 69 8 UFGT (19) View species results
Steroid pathway 47 13 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 599 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Arupctg001421_np121212120160650 Alkaloid LAMT low borderline
Arupctg001421_np121212120160670 Alkaloid LAMT medium borderline
Arupctg001566_np121212120183790 Alkaloid LAMT medium pass
Arupctg001566_np121212120183800 Alkaloid LAMT medium borderline
Arupctg000564_np121212120009190 Alkaloid MPO medium pass
Arupctg001284_np121212120134310 Alkaloid MPO high pass
Arupctg001298_np121212120138140 Alkaloid MPO medium pass
Arupctg000871_np121212120071760 Alkaloid NCS medium borderline
Arupctg000896_np121212120081310 Alkaloid NCS medium borderline
Arupctg001172_np121212120120440 Alkaloid NCS low borderline
Arupctg000215_np121212120001340 Alkaloid NMT medium pass
Arupctg000305_np121212120003330 Alkaloid NMT low borderline
Arupctg000578_np121212120009930 Alkaloid NMT low borderline
Arupctg000580_np121212120011130 Alkaloid NMT low borderline
Arupctg000607_np121212120016000 Alkaloid NMT medium borderline
Arupctg000657_np121212120025490 Alkaloid NMT medium pass
Arupctg000670_np121212120029620 Alkaloid NMT low borderline
Arupctg000670_np121212120030730 Alkaloid NMT medium pass
Arupctg000685_np121212120035420 Alkaloid NMT medium pass
Arupctg000690_np121212120036270 Alkaloid NMT medium borderline
Arupctg000708_np121212120043360 Alkaloid NMT low borderline
Arupctg000745_np121212120047000 Alkaloid NMT medium pass
Arupctg000745_np121212120047450 Alkaloid NMT low borderline
Arupctg000784_np121212120054650 Alkaloid NMT medium borderline
Arupctg000800_np121212120055120 Alkaloid NMT low borderline
Arupctg000854_np121212120069880 Alkaloid NMT low borderline
Arupctg000881_np121212120074480 Alkaloid NMT low borderline
Arupctg000882_np121212120074970 Alkaloid NMT medium pass
Arupctg000893_np121212120079670 Alkaloid NMT medium pass
Arupctg000896_np121212120081330 Alkaloid NMT low borderline
Arupctg000906_np121212120085220 Alkaloid NMT low borderline
Arupctg000906_np121212120085770 Alkaloid NMT low borderline
Arupctg000906_np121212120086000 Alkaloid NMT medium pass
Arupctg000909_np121212120087840 Alkaloid NMT low borderline
Arupctg000933_np121212120089380 Alkaloid NMT medium pass
Arupctg000933_np121212120089860 Alkaloid NMT medium pass
Arupctg000963_np121212120093860 Alkaloid NMT medium borderline
Arupctg000963_np121212120093870 Alkaloid NMT low borderline
Arupctg000990_np121212120097970 Alkaloid NMT low borderline
Arupctg001009_np121212120100170 Alkaloid NMT medium pass
Arupctg001012_np121212120100250 Alkaloid NMT medium pass
Arupctg001030_np121212120102690 Alkaloid NMT low borderline
Arupctg001030_np121212120102700 Alkaloid NMT medium pass
Arupctg001031_np121212120102790 Alkaloid NMT medium pass
Arupctg001043_np121212120104610 Alkaloid NMT medium pass
Arupctg001065_np121212120107520 Alkaloid NMT medium pass
Arupctg001065_np121212120107540 Alkaloid NMT low borderline
Arupctg001083_np121212120108930 Alkaloid NMT low borderline
Arupctg001111_np121212120114060 Alkaloid NMT low borderline
Arupctg001142_np121212120116310 Alkaloid NMT low borderline