PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
armoracia_rusticana_Arr28882 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr2904 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr2927 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr2949 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr29925 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr30194 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr3028 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr3041 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr30807 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr31246 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr31493 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr32022 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr3275 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr33075 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr33209 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr33467 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr33864 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr34019 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr34554 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr34556 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr34557 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr35068 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr35070 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr35073 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr36488 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr36542 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr36543 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr37263 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr37412 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr37413 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr39373 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr40117 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr41127 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr41128 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr41130 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr41131 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr41139 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr41140 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr41287 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr41644 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr41672 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr41829 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr4363 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr4364 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr4365 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr4366 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr4367 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr4440 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr6767 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr6768 Alkaloid 7DLGT high pass