Bartramia ithyphylla (bartramia_ithyphylla)
Imported from atlas release summary for Bartramia ithyphylla.
922
Candidate Protein Records
652
Pathway-Level Records
1736
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1736
Family-Level Calls
C4H
6.68%
C3'H/CYP98A
5.59%
BAHD
5.24%
POD
4.9%
4CL
4.84%
CYP76
4.38%
NMT
3.69%
IFS
2.71%
Other Families
61.98%
More Families (95)
DWF4/CYP90B1
41
2.36%
BR6OX2/CYP85A2
41
2.36%
F3H
40
2.3%
T3O
39
2.25%
STR
39
2.25%
F3'H/CYP75B
37
2.13%
UGT
36
2.07%
IFR
35
2.02%
PYKS
34
1.96%
GS
33
1.9%
7DLGT
33
1.9%
UFGT
32
1.84%
PAL
30
1.73%
CODM/T6ODM
24
1.38%
CAD
22
1.27%
CHS
21
1.21%
IO
19
1.09%
H6H
19
1.09%
TRI/TRII
19
1.09%
SMT1/SMT2/SMT3
19
1.09%
CYP71
19
1.09%
T16H
18
1.04%
F3'5'H/CYP75A
18
1.04%
LAC
18
1.04%
COMT
17
0.98%
RAS
16
0.92%
HCT
15
0.86%
SLS
14
0.81%
NCS
13
0.75%
7DLH
12
0.69%
CYP90D1
12
0.69%
CAS
12
0.69%
G8O/G8H
11
0.63%
F5H/CYP84A
11
0.63%
CYP80B1
10
0.58%
CNMT
10
0.58%
8HGO
9
0.52%
SGD
9
0.52%
ANR
9
0.52%
FNS
9
0.52%
CSE
9
0.52%
CPD/CYP90A1
9
0.52%
PMT
8
0.46%
16OMT
8
0.46%
COR
8
0.46%
LAMT
7
0.4%
AACT
7
0.4%
TYDC_DDC
6
0.35%
DFR
6
0.35%
CCR
6
0.35%
SQS/FDFT1
6
0.35%
TPS
6
0.35%
TDC
5
0.29%
BBE
5
0.29%
ISY
5
0.29%
ANS/LDOX
5
0.29%
CPR
5
0.29%
GGPPS
5
0.29%
HDS/IspG
5
0.29%
HDR/IspH
5
0.29%
MPO
4
0.23%
FLS
4
0.23%
BR6OX1/CYP85A1
4
0.23%
DWF5
4
0.23%
SQE
4
0.23%
ROT3/CYP90C1
4
0.23%
DET2
4
0.23%
FPPS
4
0.23%
MVK
4
0.23%
DXR
3
0.17%
ADC
2
0.12%
CYP80F1
2
0.12%
GES
2
0.12%
CYP719
2
0.12%
CHI
2
0.12%
TAT
2
0.12%
SMO1/SMO2
2
0.12%
DXS
2
0.12%
MCT/IspD
2
0.12%
HMGR
2
0.12%
MVD
2
0.12%
6OMT_4OMT_SOMT
1
0.06%
CCoAOMT
1
0.06%
HPPR
1
0.06%
CYP51G1
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
HYD1
1
0.06%
PMK
1
0.06%
MDS/IspF
1
0.06%
CMK/IspE
1
0.06%
IDI
1
0.06%
HMGS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 168 | 12 | POD (80) | View species results |
| Terpenoid pathway | 161 | 19 | BAHD (59) | View species results |
| Alkaloid pathway | 136 | 19 | NMT (26) | View species results |
| Flavonoid pathway | 87 | 10 | UFGT (29) | View species results |
| Rosmarinic acid pathway | 67 | 7 | C4H (31) | View species results |
| Steroid pathway | 33 | 12 | CAS (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 660 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 122 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Bith1770073640 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Bith1790076890 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith1850085850 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith1970090920 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Bith1970090930 | Terpenoid | CYP76 | medium | pass | CYP76__00015__sp_P0DKI2_C76AN_BETVU |
| Bith1970091100 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Bith1970092210 | Terpenoid | CYP76 | medium | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Bith1970098480 | Terpenoid | CYP76 | low | borderline | CYP76__00015__sp_P0DKI2_C76AN_BETVU |
| Bith1970098500 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Bith2160103980 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Bith2230110540 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Bith2230110550 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Bith2230110580 | Terpenoid | CYP76 | medium | pass | CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF |
| Bith2240119580 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith2340125090 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith2360126300 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Bith2400130850 | Terpenoid | CYP76 | low | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Bith2430133700 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| Bith2470134730 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith2560141130 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Bith2560144970 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Bith260149260 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Bith260149270 | Terpenoid | CYP76 | medium | pass | CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ |
| Bith260149280 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Bith260149290 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Bith260149320 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Bith260149350 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Bith260149360 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Bith2620152660 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Bith2670157130 | Terpenoid | CYP76 | low | borderline | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| Bith2690161460 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Bith290164890 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Bith320173750 | Terpenoid | CYP76 | medium | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Bith320175730 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith420194370 | Terpenoid | CYP76 | low | borderline | CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ |
| Bith460196230 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith480196640 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Bith480196650 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Bith490196690 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Bith500201960 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Bith500202020 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith50199860 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Bith580203670 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith600210440 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Bith60207910 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Bith610212560 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Bith640216430 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Bith70223800 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| Bith70225030 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Bith720233700 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |