PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

922
Candidate Protein Records
652
Pathway-Level Records
1736
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bith500202450 Alkaloid STR low borderline
Bith640217010 Alkaloid STR low borderline
Bith670218920 Alkaloid STR low borderline
Bith70223550 Alkaloid STR low borderline
Bith70226930 Alkaloid STR medium pass
Bith710231770 Alkaloid STR medium pass
Bith990266820 Alkaloid STR low borderline
Bith130025140 Alkaloid T16H medium borderline
Bith130025290 Alkaloid T16H medium borderline
Bith1480037300 Alkaloid T16H medium borderline
Bith1480037530 Alkaloid T16H medium borderline
Bith1770072740 Alkaloid T16H medium borderline
Bith1790076890 Alkaloid T16H medium borderline
Bith1970098460 Alkaloid T16H medium borderline
Bith2240119580 Alkaloid T16H medium borderline
Bith2340125090 Alkaloid T16H medium borderline
Bith260149260 Alkaloid T16H medium borderline
Bith260149270 Alkaloid T16H medium pass
Bith3470189290 Alkaloid T16H low borderline
Bith480196640 Alkaloid T16H medium borderline
Bith480196650 Alkaloid T16H medium borderline
Bith610212820 Alkaloid T16H low borderline
Bith640216430 Alkaloid T16H medium borderline
Bith720233700 Alkaloid T16H medium borderline
Bith921550259120 Alkaloid T16H medium borderline
Bith10003020 Alkaloid T3O low borderline
Bith10003060 Alkaloid T3O low borderline
Bith10007620 Alkaloid T3O medium borderline
Bith10011050 Alkaloid T3O medium borderline
Bith130024050 Alkaloid T3O medium borderline
Bith130029750 Alkaloid T3O medium pass
Bith140033900 Alkaloid T3O low borderline
Bith1530048430 Alkaloid T3O medium pass
Bith1570049800 Alkaloid T3O medium pass
Bith1570052290 Alkaloid T3O medium borderline
Bith1760071350 Alkaloid T3O medium pass
Bith1770073640 Alkaloid T3O medium borderline
Bith1850085850 Alkaloid T3O medium borderline
Bith1880087880 Alkaloid T3O low borderline
Bith1970092210 Alkaloid T3O medium borderline
Bith1970096750 Alkaloid T3O medium pass
Bith1970098500 Alkaloid T3O medium borderline
Bith2160103980 Alkaloid T3O medium borderline
Bith2340123750 Alkaloid T3O medium pass
Bith2560140600 Alkaloid T3O medium pass
Bith2560141130 Alkaloid T3O medium borderline
Bith2560141570 Alkaloid T3O medium pass
Bith2560144970 Alkaloid T3O medium borderline
Bith260149290 Alkaloid T3O medium borderline
Bith260149320 Alkaloid T3O medium borderline