Begonia fuchsioides (begonia_fuchsioides)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 28.34% Phenylpropanoid pathway 22.24% Alkaloid pathway 19.41% Flavonoid pathway 12.72% Rosmarinic acid pathway 10.09% Steroid pathway 7.2%

Family Distribution

1556 Candidate Genes

BAHD 6.24% C4H 6.11% C3'H/CYP98A 5.54% 4CL 4.87% POD 4.42% IFS 3.69% CYP76 3.69% T3O 3.39%

Other Families 62.05%

More Families (94)

UGT 109 2.72% 7DLGT 104 2.59% UFGT 104 2.59% F3H 102 2.54% NMT 98 2.45% STR 87 2.17% DWF4/CYP90B1 85 2.12% F3'H/CYP75B 73 1.82% BR6OX2/CYP85A2 69 1.72% CAD 67 1.67% IFR 61 1.52% SMT1/SMT2/SMT3 61 1.52% CODM/T6ODM 57 1.42% CYP71 50 1.25% PYKS 49 1.22% CSE 49 1.22% CAS 49 1.22% H6H 47 1.17% TRI/TRII 44 1.1% CYP90D1 41 1.02% HCT 40 1.0% TPS 38 0.95% ANR 37 0.92% LAC 37 0.92% RAS 37 0.92% GES 36 0.9% T16H 33 0.82% TAT 32 0.8% PMT 31 0.77% G8O/G8H 30 0.75% GS 30 0.75% PAL 30 0.75% F5H/CYP84A 30 0.75% IO 26 0.65% F3'5'H/CYP75A 26 0.65% NCS 25 0.62% CCR 25 0.62% COMT 24 0.6% CPD/CYP90A1 24 0.6% SLS 22 0.55% FNS 22 0.55% BBE 20 0.5% CYP51G1 20 0.5% ROT3/CYP90C1 17 0.42% BR6OX1/CYP85A1 17 0.42% 7DLH 16 0.4% 16OMT 15 0.37% SGD 15 0.37% CHS 15 0.37% MPO 14 0.35% 8HGO 13 0.32% CPR 13 0.32% SQE 13 0.32% CNMT 12 0.3% CYP719 12 0.3% DFR 12 0.3% CCoAOMT 12 0.3% AACT 12 0.3% FPPS 12 0.3% LAMT 10 0.25% ANS/LDOX 10 0.25% SQS/FDFT1 10 0.25% SMO1/SMO2 10 0.25% CYP80B1 9 0.22% COR 9 0.22% GGPPS 9 0.22% DET2 8 0.2% HMGR 8 0.2% MVD 8 0.2% DWF7 7 0.17% MVK 7 0.17% ISY 6 0.15% TDC 6 0.15% CHI 6 0.15% TYDC_DDC 5 0.12% HPPR 5 0.12% HYD1 5 0.12% DXS 5 0.12% ADC 4 0.1% DWF1 4 0.1% XMT_MXMT_DXMT 3 0.07% MDS/IspF 3 0.07% IDI 3 0.07% HMGS 3 0.07% DXR 3 0.07% HDR/IspH 3 0.07% PMK 3 0.07% FLS 2 0.05% DWF5 2 0.05% FK 2 0.05% CPI1 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% HDS/IspG 2 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	441	19	BAHD (193)	View species results
Phenylpropanoid pathway	346	12	POD (150)	View species results
Alkaloid pathway	302	22	NMT (47)	View species results
Flavonoid pathway	198	11	UFGT (96)	View species results
Rosmarinic acid pathway	157	7	C4H (51)	View species results
Steroid pathway	112	12	SMT1/SMT2/SMT3 (35)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	1499	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	327	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Bfucscaffold3020_cov1480246080	Terpenoid	BAHD	medium	pass	BAHD__00040__sp_Q41745_LPAT_MAIZE
Bfucscaffold3087_cov1430250700	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bfucscaffold3098_cov1320252160	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bfucscaffold3137_cov1300254380	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold31406_cov1090254560	Terpenoid	BAHD	low	borderline	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bfucscaffold3149_cov1060254800	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bfucscaffold318_cov1430257380	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bfucscaffold321_cov1520261880	Terpenoid	BAHD	medium	pass	BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Bfucscaffold321_cov1520262060	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bfucscaffold3221_cov1270262580	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bfucscaffold3221_cov1270262610	Terpenoid	BAHD	low	borderline	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bfucscaffold3240_cov1200266580	Terpenoid	BAHD	medium	pass	BAHD__00024__sp_O23393_BIA1_ARATH
Bfucscaffold3271_cov2170267800	Terpenoid	BAHD	low	borderline	BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
Bfucscaffold3281_cov1480268640	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bfucscaffold3291_cov1180269680	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bfucscaffold3299_cov1920270230	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bfucscaffold3358_cov1390273860	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bfucscaffold347_cov1400279810	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bfucscaffold3526_cov1420281590	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bfucscaffold3658_cov1190285110	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bfucscaffold369_cov1660286890	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bfucscaffold369_cov1660287840	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bfucscaffold3732_cov1410290280	Terpenoid	BAHD	medium	pass	BAHD__00032__sp_P0DO84_AT_STRNX
Bfucscaffold3759_cov1370290860	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bfucscaffold3759_cov1370291010	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bfucscaffold3799_cov1270292630	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bfucscaffold380_cov1310293360	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bfucscaffold3813_cov1580294790	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bfucscaffold3813_cov1580294910	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bfucscaffold3813_cov1580295790	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bfucscaffold385_cov1520302740	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bfucscaffold386_cov1540303600	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold386_cov1540303780	Terpenoid	BAHD	low	borderline	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Bfucscaffold3888_cov1430304500	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bfucscaffold393_cov1450305970	Terpenoid	BAHD	medium	pass	BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Bfucscaffold3993_cov1380308800	Terpenoid	BAHD	medium	pass	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bfucscaffold3993_cov1380308810	Terpenoid	BAHD	medium	pass	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bfucscaffold3993_cov1380309060	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold3993_cov1380309190	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold4136_cov1280314350	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bfucscaffold4136_cov1280314480	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bfucscaffold41469_cov1540315960	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bfucscaffold4149_cov1210316670	Terpenoid	BAHD	medium	pass	BAHD__00024__sp_O23393_BIA1_ARATH
Bfucscaffold4195_cov1170318470	Terpenoid	BAHD	medium	pass	BAHD__00031__sp_P0DO25_AT9_ACTDE
Bfucscaffold4293_cov1560322940	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bfucscaffold4295_cov1540323510	Terpenoid	BAHD	medium	pass	BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Bfucscaffold43094_cov1620324380	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
Bfucscaffold4328_cov1560325300	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold4338_cov1460326000	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Bfucscaffold4366_cov1390327680	Terpenoid	BAHD	medium	pass	BAHD__00032__sp_P0DO84_AT_STRNX