Begonia fuchsioides (begonia_fuchsioides)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 28.34% Phenylpropanoid pathway 22.24% Alkaloid pathway 19.41% Flavonoid pathway 12.72% Rosmarinic acid pathway 10.09% Steroid pathway 7.2%

Family Distribution

1556 Candidate Genes

BAHD 6.24% C4H 6.11% C3'H/CYP98A 5.54% 4CL 4.87% POD 4.42% IFS 3.69% CYP76 3.69% T3O 3.39%

Other Families 62.05%

More Families (94)

UGT 109 2.72% 7DLGT 104 2.59% UFGT 104 2.59% F3H 102 2.54% NMT 98 2.45% STR 87 2.17% DWF4/CYP90B1 85 2.12% F3'H/CYP75B 73 1.82% BR6OX2/CYP85A2 69 1.72% CAD 67 1.67% IFR 61 1.52% SMT1/SMT2/SMT3 61 1.52% CODM/T6ODM 57 1.42% CYP71 50 1.25% PYKS 49 1.22% CSE 49 1.22% CAS 49 1.22% H6H 47 1.17% TRI/TRII 44 1.1% CYP90D1 41 1.02% HCT 40 1.0% TPS 38 0.95% ANR 37 0.92% LAC 37 0.92% RAS 37 0.92% GES 36 0.9% T16H 33 0.82% TAT 32 0.8% PMT 31 0.77% G8O/G8H 30 0.75% GS 30 0.75% PAL 30 0.75% F5H/CYP84A 30 0.75% IO 26 0.65% F3'5'H/CYP75A 26 0.65% NCS 25 0.62% CCR 25 0.62% COMT 24 0.6% CPD/CYP90A1 24 0.6% SLS 22 0.55% FNS 22 0.55% BBE 20 0.5% CYP51G1 20 0.5% ROT3/CYP90C1 17 0.42% BR6OX1/CYP85A1 17 0.42% 7DLH 16 0.4% 16OMT 15 0.37% SGD 15 0.37% CHS 15 0.37% MPO 14 0.35% 8HGO 13 0.32% CPR 13 0.32% SQE 13 0.32% CNMT 12 0.3% CYP719 12 0.3% DFR 12 0.3% CCoAOMT 12 0.3% AACT 12 0.3% FPPS 12 0.3% LAMT 10 0.25% ANS/LDOX 10 0.25% SQS/FDFT1 10 0.25% SMO1/SMO2 10 0.25% CYP80B1 9 0.22% COR 9 0.22% GGPPS 9 0.22% DET2 8 0.2% HMGR 8 0.2% MVD 8 0.2% DWF7 7 0.17% MVK 7 0.17% ISY 6 0.15% TDC 6 0.15% CHI 6 0.15% TYDC_DDC 5 0.12% HPPR 5 0.12% HYD1 5 0.12% DXS 5 0.12% ADC 4 0.1% DWF1 4 0.1% XMT_MXMT_DXMT 3 0.07% MDS/IspF 3 0.07% IDI 3 0.07% HMGS 3 0.07% DXR 3 0.07% HDR/IspH 3 0.07% PMK 3 0.07% FLS 2 0.05% DWF5 2 0.05% FK 2 0.05% CPI1 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% HDS/IspG 2 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	441	19	BAHD (193)	View species results
Phenylpropanoid pathway	346	12	POD (150)	View species results
Alkaloid pathway	302	22	NMT (47)	View species results
Flavonoid pathway	198	11	UFGT (96)	View species results
Rosmarinic acid pathway	157	7	C4H (51)	View species results
Steroid pathway	112	12	SMT1/SMT2/SMT3 (35)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	1499	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	327	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
Bfucscaffold1012_cov1480001420	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Bfucscaffold10983_cov1570013170	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Bfucscaffold1101_cov1410015710	Alkaloid	NMT	medium	pass	NMT__00021__sp_O64827_SUVR5_ARATH
Bfucscaffold1165_cov1560031690	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Bfucscaffold1250_cov1540044900	Alkaloid	NMT	medium	pass	NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Bfucscaffold13278_cov1500051280	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
Bfucscaffold1328_cov1340052180	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
Bfucscaffold1351_cov1370055890	Alkaloid	NMT	medium	pass	NMT__00017__sp_F4K1J4_ATXR7_ARATH
Bfucscaffold13748_cov1440057950	Alkaloid	NMT	low	borderline	NMT__00023__sp_O82210_ANM12_ARATH
Bfucscaffold1386_cov1670060810	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Bfucscaffold1396_cov1540064740	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Bfucscaffold1417_cov1740069450	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Bfucscaffold1480_cov1460076390	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Bfucscaffold1480_cov1460076450	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Bfucscaffold1494_cov1550078680	Alkaloid	NMT	medium	pass	NMT__00050__sp_Q944H0_PEAM2_ARATH
Bfucscaffold1494_cov1550078940	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Bfucscaffold1494_cov1550080210	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
Bfucscaffold1544_cov1580090480	Alkaloid	NMT	medium	pass	NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Bfucscaffold1565_cov1450092110	Alkaloid	NMT	low	borderline	NMT__00054__sp_Q9FF80_SUVH1_ARATH
Bfucscaffold1592_cov1510099950	Alkaloid	NMT	medium	borderline	NMT__00060__sp_Q9MAT5_ANM10_ARATH
Bfucscaffold1592_cov1510100280	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
Bfucscaffold1627_cov1200104300	Alkaloid	NMT	medium	pass	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Bfucscaffold1656_cov1160106520	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Bfucscaffold1691_cov1500112140	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Bfucscaffold169_cov1370115750	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Bfucscaffold17424_cov2430121860	Alkaloid	NMT	medium	pass	NMT__00059__sp_Q9M571_PEAMT_SPIOL
Bfucscaffold1766_cov1450122620	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
Bfucscaffold1767_cov1380123070	Alkaloid	NMT	medium	pass	NMT__00024__sp_P0CB22_ATX2_ARATH
Bfucscaffold1779_cov1370124500	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
Bfucscaffold19531_cov810141510	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Bfucscaffold19667_cov1390142270	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Bfucscaffold2055_cov1820154710	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Bfucscaffold2056_cov1450154720	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Bfucscaffold206_cov1450156040	Alkaloid	NMT	low	borderline	NMT__00001__sp_A0A075D654_ANMT_RAUSE
Bfucscaffold206_cov1450156990	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
Bfucscaffold20_cov1550159270	Alkaloid	NMT	medium	pass	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Bfucscaffold21066_cov1270160420	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Bfucscaffold215_cov1390162650	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Bfucscaffold226_cov1580175860	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
Bfucscaffold2335_cov1330183760	Alkaloid	NMT	medium	borderline	NMT__00018__sp_I1M2U5_NAMT1_SOYBN
Bfucscaffold234_cov1470186850	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Bfucscaffold2479_cov1370195960	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Bfucscaffold2529_cov1470203800	Alkaloid	NMT	medium	pass	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Bfucscaffold2670_cov1580217200	Alkaloid	NMT	medium	pass	NMT__00021__sp_O64827_SUVR5_ARATH
Bfucscaffold2789_cov1470223700	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Bfucscaffold2877_cov1670232620	Alkaloid	NMT	medium	pass	NMT__00020__sp_O23372_ATXR3_ARATH
Bfucscaffold300_cov1380242270	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Bfucscaffold3013_cov1430243750	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Bfucscaffold3018_cov1440246000	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Bfucscaffold30628_cov1320248790	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH