PlantSME Plant secondary metabolism enzyme database

Begonia fuchsioides (begonia_fuchsioides)

Imported from atlas release summary for Begonia fuchsioides.

1556
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 441 19 BAHD (193) View species results
Phenylpropanoid pathway 346 12 POD (150) View species results
Alkaloid pathway 302 22 NMT (47) View species results
Flavonoid pathway 198 11 UFGT (96) View species results
Rosmarinic acid pathway 157 7 C4H (51) View species results
Steroid pathway 112 12 SMT1/SMT2/SMT3 (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1499 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 327 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Bfucscaffold1067_cov1480010570 Alkaloid IO medium borderline
Bfucscaffold1113_cov1510018560 Alkaloid IO medium borderline
Bfucscaffold119_cov1470037200 Alkaloid IO medium borderline
Bfucscaffold1396_cov1540063600 Alkaloid IO medium borderline
Bfucscaffold1417_cov1740069240 Alkaloid IO medium borderline
Bfucscaffold1939_cov2450140180 Alkaloid IO medium pass
Bfucscaffold206_cov1450156330 Alkaloid IO low borderline
Bfucscaffold2199_cov1690168850 Alkaloid IO medium borderline
Bfucscaffold2199_cov1690168860 Alkaloid IO medium borderline
Bfucscaffold234_cov1470186670 Alkaloid IO medium borderline
Bfucscaffold2868_cov1890230160 Alkaloid IO medium borderline
Bfucscaffold3207_cov1260260790 Alkaloid IO medium borderline
Bfucscaffold3799_cov1270292790 Alkaloid IO medium borderline
Bfucscaffold3813_cov1580296690 Alkaloid IO medium pass
Bfucscaffold4227_cov1690319660 Alkaloid IO medium borderline
Bfucscaffold4338_cov1460326060 Alkaloid IO low borderline
Bfucscaffold4464_cov1840333310 Alkaloid IO medium borderline
Bfucscaffold744_cov1600426140 Alkaloid IO medium borderline
Bfucscaffold82_cov1880448320 Alkaloid IO medium pass
Bfucscaffold83_cov1420450990 Alkaloid IO medium borderline
Bfucscaffold856_cov1840457450 Alkaloid IO medium pass
Bfucscaffold91233_cov1270470290 Alkaloid IO low borderline
Bfucscaffold91298_cov1920475260 Alkaloid IO medium borderline
Bfucscaffold91298_cov1920476020 Alkaloid IO medium borderline
Bfucscaffold91828_cov1590492930 Alkaloid IO low borderline
Bfucscaffold91876_cov1740501330 Alkaloid IO medium borderline