Begonia fuchsioides (begonia_fuchsioides)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 28.34% Phenylpropanoid pathway 22.24% Alkaloid pathway 19.41% Flavonoid pathway 12.72% Rosmarinic acid pathway 10.09% Steroid pathway 7.2%

Family Distribution

1556 Candidate Genes

BAHD 6.24% C4H 6.11% C3'H/CYP98A 5.54% 4CL 4.87% POD 4.42% IFS 3.69% CYP76 3.69% T3O 3.39%

Other Families 62.05%

More Families (94)

UGT 109 2.72% 7DLGT 104 2.59% UFGT 104 2.59% F3H 102 2.54% NMT 98 2.45% STR 87 2.17% DWF4/CYP90B1 85 2.12% F3'H/CYP75B 73 1.82% BR6OX2/CYP85A2 69 1.72% CAD 67 1.67% IFR 61 1.52% SMT1/SMT2/SMT3 61 1.52% CODM/T6ODM 57 1.42% CYP71 50 1.25% PYKS 49 1.22% CSE 49 1.22% CAS 49 1.22% H6H 47 1.17% TRI/TRII 44 1.1% CYP90D1 41 1.02% HCT 40 1.0% TPS 38 0.95% ANR 37 0.92% LAC 37 0.92% RAS 37 0.92% GES 36 0.9% T16H 33 0.82% TAT 32 0.8% PMT 31 0.77% G8O/G8H 30 0.75% GS 30 0.75% PAL 30 0.75% F5H/CYP84A 30 0.75% IO 26 0.65% F3'5'H/CYP75A 26 0.65% NCS 25 0.62% CCR 25 0.62% COMT 24 0.6% CPD/CYP90A1 24 0.6% SLS 22 0.55% FNS 22 0.55% BBE 20 0.5% CYP51G1 20 0.5% ROT3/CYP90C1 17 0.42% BR6OX1/CYP85A1 17 0.42% 7DLH 16 0.4% 16OMT 15 0.37% SGD 15 0.37% CHS 15 0.37% MPO 14 0.35% 8HGO 13 0.32% CPR 13 0.32% SQE 13 0.32% CNMT 12 0.3% CYP719 12 0.3% DFR 12 0.3% CCoAOMT 12 0.3% AACT 12 0.3% FPPS 12 0.3% LAMT 10 0.25% ANS/LDOX 10 0.25% SQS/FDFT1 10 0.25% SMO1/SMO2 10 0.25% CYP80B1 9 0.22% COR 9 0.22% GGPPS 9 0.22% DET2 8 0.2% HMGR 8 0.2% MVD 8 0.2% DWF7 7 0.17% MVK 7 0.17% ISY 6 0.15% TDC 6 0.15% CHI 6 0.15% TYDC_DDC 5 0.12% HPPR 5 0.12% HYD1 5 0.12% DXS 5 0.12% ADC 4 0.1% DWF1 4 0.1% XMT_MXMT_DXMT 3 0.07% MDS/IspF 3 0.07% IDI 3 0.07% HMGS 3 0.07% DXR 3 0.07% HDR/IspH 3 0.07% PMK 3 0.07% FLS 2 0.05% DWF5 2 0.05% FK 2 0.05% CPI1 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% HDS/IspG 2 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	441	19	BAHD (193)	View species results
Phenylpropanoid pathway	346	12	POD (150)	View species results
Alkaloid pathway	302	22	NMT (47)	View species results
Flavonoid pathway	198	11	UFGT (96)	View species results
Rosmarinic acid pathway	157	7	C4H (51)	View species results
Steroid pathway	112	12	SMT1/SMT2/SMT3 (35)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	1499	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	327	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Gene	Pathway	Family	Confidence	Status	Best Target
Bfucscaffold1675_cov1350110050	Terpenoid	BAHD	medium	pass	BAHD__00092__sp_Q9SU91_LPXA_ARATH
Bfucscaffold1693_cov1400113040	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bfucscaffold1700_cov1560118270	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bfucscaffold17041_cov940118720	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bfucscaffold1723_cov1590120420	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bfucscaffold1777_cov1670123750	Terpenoid	BAHD	medium	pass	BAHD__00024__sp_O23393_BIA1_ARATH
Bfucscaffold1779_cov1370124250	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
Bfucscaffold1780_cov1550125980	Terpenoid	BAHD	low	borderline	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bfucscaffold1780_cov1550126030	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bfucscaffold1793_cov1370128300	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bfucscaffold1793_cov1370129410	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bfucscaffold1807_cov1790129930	Terpenoid	BAHD	low	borderline	BAHD__00061__sp_Q8VYS8_ZDH24_ARATH
Bfucscaffold18654_cov1250134780	Terpenoid	BAHD	medium	pass	BAHD__00092__sp_Q9SU91_LPXA_ARATH
Bfucscaffold1933_cov2110139990	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bfucscaffold1981_cov1760143320	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bfucscaffold1_cov1620148450	Terpenoid	BAHD	low	borderline	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bfucscaffold2008_cov1190149680	Terpenoid	BAHD	low	borderline	BAHD__00012__sp_A1XWY7_CFAT_PETHY
Bfucscaffold2009_cov1360151050	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bfucscaffold20264_cov1190152900	Terpenoid	BAHD	medium	pass	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Bfucscaffold206_cov1450156100	Terpenoid	BAHD	medium	pass	BAHD__00032__sp_P0DO84_AT_STRNX
Bfucscaffold206_cov1450156840	Terpenoid	BAHD	medium	pass	BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Bfucscaffold21223_cov1330161310	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bfucscaffold21685_cov1700163770	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bfucscaffold2200_cov1290169450	Terpenoid	BAHD	medium	pass	BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Bfucscaffold2258_cov1580173680	Terpenoid	BAHD	medium	pass	BAHD__00084__sp_Q9M115_ZDH16_ARATH
Bfucscaffold2271_cov1850176880	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
Bfucscaffold2271_cov1850177880	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Bfucscaffold2286_cov1980178990	Terpenoid	BAHD	medium	pass	BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
Bfucscaffold23133_cov1160181440	Terpenoid	BAHD	low	borderline	BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Bfucscaffold2335_cov1330184200	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold2339_cov1550185330	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
Bfucscaffold234_cov1470186880	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bfucscaffold234_cov1470186900	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bfucscaffold2383_cov1790190490	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold2524_cov1360199500	Terpenoid	BAHD	medium	pass	BAHD__00048__sp_Q5M757_ZDH15_ARATH
Bfucscaffold2524_cov1360199690	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bfucscaffold2524_cov1360199750	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bfucscaffold2524_cov1360200290	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bfucscaffold2529_cov1470202590	Terpenoid	BAHD	low	borderline	BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bfucscaffold2532_cov1830205780	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold2534_cov1880205970	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bfucscaffold2539_cov1730207260	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bfucscaffold2539_cov1730207300	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bfucscaffold2553_cov1450209070	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bfucscaffold255_cov1760209850	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bfucscaffold2703_cov1640218560	Terpenoid	BAHD	medium	pass	BAHD__00061__sp_Q8VYS8_ZDH24_ARATH
Bfucscaffold2716_cov1500219440	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bfucscaffold2716_cov1500219460	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bfucscaffold2767_cov1630222230	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bfucscaffold2776_cov1480222880	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH