PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2226
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Bdis04G0028570.8 Flavonoid 4CL low borderline
Bdis04G0028570.9 Flavonoid 4CL low borderline
Bdis04G0031400.1 Flavonoid 4CL low borderline
Bdis04G0035030.1 Flavonoid 4CL low borderline
Bdis04G0035030.2 Flavonoid 4CL low borderline
Bdis04G0035030.3 Flavonoid 4CL low borderline
Bdis04G0045090.1 Flavonoid 4CL medium pass
Bdis04G0050000.1 Flavonoid 4CL low borderline
Bdis04G0050000.2 Flavonoid 4CL low borderline
Bdis04G0051820.1 Flavonoid 4CL low borderline
Bdis04G0053800.1 Flavonoid 4CL low borderline
Bdis05G0005400.1 Flavonoid 4CL medium pass
Bdis05G0008510.1 Flavonoid 4CL low borderline
Bdis05G0008510.2 Flavonoid 4CL low borderline
Bdis05G0008510.4 Flavonoid 4CL low borderline
Bdis05G0008510.5 Flavonoid 4CL low borderline
Bdis05G0029680.1 Flavonoid 4CL medium pass
Bdis05G0030550.1 Flavonoid 4CL medium pass
Bdis01G0004630.1 Flavonoid ANR medium borderline
Bdis01G0026520.1 Flavonoid ANR medium borderline
Bdis01G0026530.1 Flavonoid ANR medium borderline
Bdis01G0026540.1 Flavonoid ANR medium borderline
Bdis01G0037340.1 Flavonoid ANR medium borderline
Bdis01G0039880.1 Flavonoid ANR medium borderline
Bdis01G0043360.1 Flavonoid ANR medium borderline
Bdis01G0072400.1 Flavonoid ANR low borderline
Bdis02G0002310.1 Flavonoid ANR medium borderline
Bdis02G0016650.1 Flavonoid ANR medium borderline
Bdis02G0016670.1 Flavonoid ANR medium borderline
Bdis02G0018150.1 Flavonoid ANR low borderline
Bdis02G0018150.2 Flavonoid ANR low borderline
Bdis02G0018150.3 Flavonoid ANR low borderline
Bdis02G0050410.1 Flavonoid ANR medium borderline
Bdis02G0050550.1 Flavonoid ANR low borderline
Bdis03G0021910.1 Flavonoid ANR low borderline
Bdis03G0021910.2 Flavonoid ANR low borderline
Bdis03G0024010.1 Flavonoid ANR medium borderline
Bdis03G0038930.1 Flavonoid ANR low borderline
Bdis03G0042130.1 Flavonoid ANR medium borderline
Bdis03G0042130.2 Flavonoid ANR medium borderline
Bdis04G0010760.1 Flavonoid ANR medium borderline
Bdis04G0040470.1 Flavonoid ANR high pass
Bdis04G0040490.1 Flavonoid ANR medium borderline
Bdis04G0040490.3 Flavonoid ANR medium borderline
Bdis05G0025510.1 Flavonoid ANR medium borderline
Bdis05G0025530.1 Flavonoid ANR medium borderline
Bdis05G0025540.1 Flavonoid ANR medium borderline
Bdis01G0056500.2 Flavonoid ANS/LDOX medium borderline
Bdis02G0024110.1 Flavonoid ANS/LDOX medium borderline
Bdis02G0057150.2 Flavonoid ANS/LDOX medium borderline